SBAD_0000456201 (Soboliphyme baturini)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) SBAD_0000456201 T174960_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.726 0.726
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SBAD_0000456201-mRNA-1 EBF1 6 111

Links

Other EBF1 family TFs
Other Soboliphyme baturini TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004632 Ricinus communis 29848.m004632 I
SHN3 Arabidopsis lyrata Al_scaffold_0006_1028 I
SHN2 Arabidopsis thaliana AT5G11190 D
SHN3 Arabidopsis thaliana AT5G25390 I
Bo7g096000 Brassica oleracea Bo7g096000 N
Bo9g011380 Brassica oleracea Bo9g011380 I
Bo9g171490 Brassica oleracea Bo9g171490 I
Bostr.23997s0014 Boechera stricta Bostr.23997s0014 I
Bostr.29827s0278 Boechera stricta Bostr.29827s0278 I
Bra008985 Brassica rapa Bra008985 I
Bra036543 Brassica rapa Bra036543 I
Cagra.1110s0005 Capsella grandiflora Cagra.1110s0005 I
Carubv10002040m.g Capsella rubella Carubv10002040m.g I
Carubv10003042m.g Capsella rubella Carubv10003042m.g I
Carubv10003050m.g Capsella rubella Carubv10003050m.g I
cassava10120.m1 Manihot esculenta cassava10120.m1 I
cassava30505.valid.m1 Manihot esculenta cassava30505.valid.m1 I
cassava40012.m1 Manihot esculenta cassava40012.m1 I
Ca_01764 Cicer arietinum Ca_01764 I
Ca_09050 Cicer arietinum Ca_09050 I
Ciclev10009526m.g Citrus clementina Ciclev10009526m.g I
Cla021283 Citrullus lanatus Cla021283 I
Cucsa.310360 Cucumis sativus Cucsa.310360 I
evm.TU.supercontig_259.2 Carica papaya evm.TU.supercontig_259.2 I
SHN2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002026 I
gene11636-v1.0-hybrid Fragaria vesca gene11636-v1.0-hybrid I
GLYMA04G07140 Glycine max GLYMA04G07140 I
GLYMA06G07240 Glycine max GLYMA06G07240 I
GLYMA17G31900 Glycine max GLYMA17G31900 I
Gorai.001G033200 Gossypium raimondii Gorai.001G033200 I
Gorai.004G292600 Gossypium raimondii Gorai.004G292600 I
Gorai.010G114800 Gossypium raimondii Gorai.010G114800 I
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I
Lus10002015.g Linum usitatissimum Lus10002015.g I
Lus10002912.g Linum usitatissimum Lus10002912.g I
Lus10019414.g Linum usitatissimum Lus10019414.g I
MDP0000178263 Malus domestica MDP0000178263 I
MDP0000287350 Malus domestica MDP0000287350 I
mgf017744m Mimulus guttatus mgf017744m I
MTR_1g012470 Medicago truncatula MTR_1g012470 I
MTR_3g107380 Medicago truncatula MTR_3g107380 I
orange1.1g028913m.g Citrus sinensis orange1.1g028913m.g I
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I
Pm004616 Prunus mume Pm004616 I
POPTR_0006s26990 Populus trichocarpa POPTR_0006s26990 I
POPTR_0018s01680 Populus trichocarpa POPTR_0018s01680 I
PRUPE_ppa023908mg Prunus persica PRUPE_ppa023908mg I
SapurV1A.0043s0690 Salix purpurea SapurV1A.0043s0690 I
SapurV1A.0192s0020 Salix purpurea SapurV1A.0192s0020 I
TCM_037007 Theobroma cacao TCM_037007 I
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I
VIT_04s0008g05440 Vitis vinifera VIT_04s0008g05440 I