CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4BL_00160D0BD
(
Triticum aestivum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Traes_4BL_00160D0BD
T180621_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4BL_00160D0BD.1
FAR1
4
46
EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFRED
Links
Other
FAR1
family TFs
Other
Triticum aestivum
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29646.m001068
Ricinus communis
29646.m001068
I
0.000
30068.m002661
Ricinus communis
30068.m002661
I
0.000
30174.m008698
Ricinus communis
30174.m008698
I
0.000
GBF2
Arabidopsis lyrata
Al_scaffold_0006_3899
I
0.000
AMTR_s00048p00108400
Amborella trichopoda
AMTR_s00048p00108400
I
0.000
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
0.000
AMTR_s00158p00056990
Amborella trichopoda
AMTR_s00158p00056990
I
0.000
Aquca_002_01218
Aquilegia coerulea
Aquca_002_01218
I
0.000
Aquca_013_00209
Aquilegia coerulea
Aquca_013_00209
I
0.000
Aquca_037_00034
Aquilegia coerulea
Aquca_037_00034
I
0.000
BZIP68
Arabidopsis thaliana
AT1G32150
D
0.000
BZIP16
Arabidopsis thaliana
AT2G35530
D
0.000
GBF3
Arabidopsis thaliana
AT2G46270
D
0.000
GBF2
Arabidopsis thaliana
AT4G01120
D
0.000
GBF1
Arabidopsis thaliana
AT4G36730
D
0.000
BGIOSGA001085
Oryza indica
BGIOSGA001085
I
0.000
BGIOSGA020389
Oryza indica
BGIOSGA020389
I
0.000
BGIOSGA025382
Oryza indica
BGIOSGA025382
I
0.000
BGIOSGA036419
Oryza indica
BGIOSGA036419
I
0.000
Bo1g005460
Brassica oleracea
Bo1g005460
I
0.000
Bo3g039150
Brassica oleracea
Bo3g039150
I
0.000
Bo4g010410
Brassica oleracea
Bo4g010410
I
0.000
Bo4g038560
Brassica oleracea
Bo4g038560
I
0.000
Bo9g003700
Brassica oleracea
Bo9g003700
I
0.000
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
0.000
Bostr.3359s0141
Boechera stricta
Bostr.3359s0141
I
0.000
Bostr.7365s0064
Boechera stricta
Bostr.7365s0064
I
0.000
Bostr.7867s1529
Boechera stricta
Bostr.7867s1529
I
0.000
Bra004550
Brassica rapa
Bra004550
I
0.000
Bra005335
Brassica rapa
Bra005335
I
0.000
Bra010572
Brassica rapa
Bra010572
I
0.000
Bra011701
Brassica rapa
Bra011701
I
0.000
Bra037382
Brassica rapa
Bra037382
I
0.000
BRADI2G15940
Brachypodium distachyon
BRADI2G15940
I
0.000
BRADI2G45567
Brachypodium distachyon
BRADI2G45567
I
0.000
Cagra.0050s0071
Capsella grandiflora
Cagra.0050s0071
I
0.000
Cagra.0993s0063
Capsella grandiflora
Cagra.0993s0063
I
0.000
Cagra.1372s0011
Capsella grandiflora
Cagra.1372s0011
I
0.000
Cagra.3359s0011
Capsella grandiflora
Cagra.3359s0011
I
0.000
Cagra.5996s0003
Capsella grandiflora
Cagra.5996s0003
I
0.000
Carubv10001247m.g
Capsella rubella
Carubv10001247m.g
I
0.000
Carubv10005287m.g
Capsella rubella
Carubv10005287m.g
I
0.000
Carubv10023434m.g
Capsella rubella
Carubv10023434m.g
I
0.000
cassava11837.valid.m1
Manihot esculenta
cassava11837.valid.m1
I
0.000
cassava29861.valid.m1
Manihot esculenta
cassava29861.valid.m1
I
0.000
cassava29862.valid.m1
Manihot esculenta
cassava29862.valid.m1
I
0.000
cassava37043.valid.m1
Manihot esculenta
cassava37043.valid.m1
I
0.000
cassava43569.valid.m1
Manihot esculenta
cassava43569.valid.m1
I
0.000
cassava43570.valid.m1
Manihot esculenta
cassava43570.valid.m1
I
0.000
cassava43571.valid.m1
Manihot esculenta
cassava43571.valid.m1
I
0.000
cassava45491.m1
Manihot esculenta
cassava45491.m1
I
0.000
cassava46468.m1
Manihot esculenta
cassava46468.m1
I
0.000
Ca_01293
Cicer arietinum
Ca_01293
I
0.000
Ca_11455
Cicer arietinum
Ca_11455
I
0.000
Ca_15839
Cicer arietinum
Ca_15839
I
0.000
Ca_17787
Cicer arietinum
Ca_17787
I
0.000
chr1.CM0579.280.nd
Lotus japonicus
chr1.CM0579.280.nd
I
0.000
chr2.LjT41P23.50.nc
Lotus japonicus
chr2.LjT41P23.50.nc
I
0.000
Ciclev10001333m.g
Citrus clementina
Ciclev10001333m.g
I
0.000
Ciclev10020314m.g
Citrus clementina
Ciclev10020314m.g
I
0.000
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
0.000
Cla008988
Citrullus lanatus
Cla008988
I
0.000
Cla014415
Citrullus lanatus
Cla014415
I
0.000
Cla016502
Citrullus lanatus
Cla016502
I
0.000
Cla021500
Citrullus lanatus
Cla021500
I
0.000
CPRF1_PETCR
Petroselinum crispum
CPRF1_PETCR
D
0.000
CPRF3_PETCR
Petroselinum crispum
CPRF3_PETCR
D
0.000
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
0.000
Cucsa.258940
Cucumis sativus
Cucsa.258940
I
0.000
Cucsa.312800
Cucumis sativus
Cucsa.312800
I
0.000
Cucsa.322110
Cucumis sativus
Cucsa.322110
I
0.000
estExt_fgenesh1_pg.C_10522
Micromonas pusilla
estExt_fgenesh1_pg.C_10522
I
0.000
estExt_fgenesh2_pg.C_Chr_020452
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_020452
I
0.000
Eucgr.E00078
Eucalyptus grandis
Eucgr.E00078
I
0.000
Eucgr.E00223
Eucalyptus grandis
Eucgr.E00223
I
0.000
Eucgr.H01256
Eucalyptus grandis
Eucgr.H01256
I
0.000
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
0.000
evm.TU.supercontig_2741.1
Carica papaya
evm.TU.supercontig_2741.1
I
0.000
F775_07803
Aegilops tauschii
F775_07803
I
0.000
GBF3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4002338
I
0.000
bZIP68
Arabidopsis lyrata
fgenesh2_kg.1__3350__AT1G32150.1
I
0.000
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
0.000
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
0.000
gene29546-v1.0-hybrid
Fragaria vesca
gene29546-v1.0-hybrid
I
0.000
gene32022-v1.0-hybrid
Fragaria vesca
gene32022-v1.0-hybrid
I
0.000
gene32024-v1.0-hybrid
Fragaria vesca
gene32024-v1.0-hybrid
I
0.000
GLYMA01G01740
Glycine max
GLYMA01G01740
I
0.000
GLYMA02G06550
Glycine max
GLYMA02G06550
I
0.000
GLYMA03G41590
Glycine max
GLYMA03G41590
I
0.000
GLYMA07G06620
Glycine max
GLYMA07G06620
I
0.000
GLYMA08G34280
Glycine max
GLYMA08G34280
I
0.000
GLYMA09G34170
Glycine max
GLYMA09G34170
I
0.000
GLYMA16G03190
Glycine max
GLYMA16G03190
I
0.000
GLYMA16G15810
Glycine max
GLYMA16G15810
I
0.000
GLYMA16G25600
Glycine max
GLYMA16G25600
I
0.000
GLYMA19G44190
Glycine max
GLYMA19G44190
I
0.000
Gorai.003G185700
Gossypium raimondii
Gorai.003G185700
I
0.000
Gorai.004G153100
Gossypium raimondii
Gorai.004G153100
I
0.000
Gorai.004G181900
Gossypium raimondii
Gorai.004G181900
I
0.000
Gorai.007G105100
Gossypium raimondii
Gorai.007G105100
I
0.000
Gorai.007G205700
Gossypium raimondii
Gorai.007G205700
I
0.000
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
0.000
Gorai.008G123200
Gossypium raimondii
Gorai.008G123200
I
0.000
GRMZM2G011932
Zea mays
GRMZM2G011932
I
0.000
GRMZM2G019106
Zea mays
GRMZM2G019106
I
0.000
GRMZM2G074373
Zea mays
GRMZM2G074373
I
0.000
GRMZM2G095078
Zea mays
GRMZM2G095078
I
0.000
GRMZM2G117851
Zea mays
GRMZM2G117851
I
0.000
GRMZM2G153144
Zea mays
GRMZM2G153144
I
0.000
GRMZM2G160136
Zea mays
GRMZM2G160136
I
0.000
GRMZM2G171370
Zea mays
GRMZM2G171370
I
0.000
GRMZM5G848942
Zea mays
GRMZM5G848942
I
0.000
GSMUA_Achr1G05050_001
Musa acuminata
GSMUA_Achr1G05050_001
I
0.000
GSMUA_Achr4G04530_001
Musa acuminata
GSMUA_Achr4G04530_001
I
0.000
GSMUA_Achr4G11610_001
Musa acuminata
GSMUA_Achr4G11610_001
I
0.000
GSMUA_Achr6G32000_001
Musa acuminata
GSMUA_Achr6G32000_001
I
0.000
GSMUA_Achr9G05310_001
Musa acuminata
GSMUA_Achr9G05310_001
I
0.000
gw1.27.125.1
Physcomitrella patens
gw1.27.125.1
I
0.000
gw1.3.298.1
Physcomitrella patens
gw1.3.298.1
I
0.000
gw1.33.173.1
Physcomitrella patens
gw1.33.173.1
I
0.000
gw2.11.550.1
Micromonas sp RCC299
gw2.11.550.1
I
0.000
LjSGA_036158.1
Lotus japonicus
LjSGA_036158.1
I
0.000
LPERR01G21580
Leersia perrieri
LPERR01G21580
I
0.000
LPERR05G21930
Leersia perrieri
LPERR05G21930
I
0.000
LPERR07G06120
Leersia perrieri
LPERR07G06120
I
0.000
LPERR12G05920
Leersia perrieri
LPERR12G05920
I
0.000
Lus10003034.g
Linum usitatissimum
Lus10003034.g
I
0.000
Lus10005146.g
Linum usitatissimum
Lus10005146.g
I
0.000
Lus10014324.g
Linum usitatissimum
Lus10014324.g
I
0.000
Lus10026033.g
Linum usitatissimum
Lus10026033.g
I
0.000
MDP0000138052
Malus domestica
MDP0000138052
I
0.000
MDP0000185553
Malus domestica
MDP0000185553
I
0.000
MDP0000231274
Malus domestica
MDP0000231274
I
0.000
MDP0000239688
Malus domestica
MDP0000239688
I
0.000
MDP0000286846
Malus domestica
MDP0000286846
I
0.000
MDP0000493795
Malus domestica
MDP0000493795
I
0.000
MDP0000545420
Malus domestica
MDP0000545420
I
0.000
mgf000639m
Mimulus guttatus
mgf000639m
I
0.000
mgf003302m
Mimulus guttatus
mgf003302m
I
0.000
mgf005151m
Mimulus guttatus
mgf005151m
I
0.000
mgf008195m
Mimulus guttatus
mgf008195m
I
0.000
mgf008605m
Mimulus guttatus
mgf008605m
I
0.000
mgf013375m
Mimulus guttatus
mgf013375m
I
0.000
mgf013423m
Mimulus guttatus
mgf013423m
I
0.000
mgf014804m
Mimulus guttatus
mgf014804m
I
0.000
MLOC_6711
Hordeum vulgare
MLOC_6711
I
0.000
MTR_5g028850
Medicago truncatula
MTR_5g028850
I
0.000
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
0.000
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
0.000
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
0.000
OB01G34490
Oryza brachyantha
OB01G34490
I
0.000
OB05G33790
Oryza brachyantha
OB05G33790
I
0.000
OB07G15280
Oryza brachyantha
OB07G15280
I
0.000
OB12G16310
Oryza brachyantha
OB12G16310
I
0.000
OBART01G25300
Oryza barthii
OBART01G25300
I
0.000
OBART05G26280
Oryza barthii
OBART05G26280
I
0.000
OBART07G07070
Oryza barthii
OBART07G07070
I
0.000
OBART12G06770
Oryza barthii
OBART12G06770
I
0.000
OGLUM01G29060
Oryza glumaepatula
OGLUM01G29060
I
0.000
OGLUM05G27920
Oryza glumaepatula
OGLUM05G27920
I
0.000
OGLUM07G06770
Oryza glumaepatula
OGLUM07G06770
I
0.000
OGLUM12G08090
Oryza glumaepatula
OGLUM12G08090
I
0.000
OLONG_003667
Oryza longistaminata
OLONG_003667
I
0.000
OLONG_021599
Oryza longistaminata
OLONG_021599
I
0.000
OLONG_021967
Oryza longistaminata
OLONG_021967
I
0.000
OLONG_022047
Oryza longistaminata
OLONG_022047
I
0.000
OMERI01G23000
Oryza meridionalis
OMERI01G23000
I
0.000
OMERI03G30340
Oryza meridionalis
OMERI03G30340
I
0.000
OMERI07G05820
Oryza meridionalis
OMERI07G05820
I
0.000
OMERI12G04560
Oryza meridionalis
OMERI12G04560
I
0.000
ONIVA01G28540
Oryza nivara
ONIVA01G28540
I
0.000
ONIVA05G28290
Oryza nivara
ONIVA05G28290
I
0.000
ONIVA07G05320
Oryza nivara
ONIVA07G05320
I
0.000
ONIVA12G06500
Oryza nivara
ONIVA12G06500
I
0.000
OPUNC01G25140
Oryza punctata
OPUNC01G25140
I
0.000
OPUNC02G01690
Oryza punctata
OPUNC02G01690
I
0.000
OPUNC05G23850
Oryza punctata
OPUNC05G23850
I
0.000
OPUNC07G06790
Oryza punctata
OPUNC07G06790
I
0.000
OPUNC12G06450
Oryza punctata
OPUNC12G06450
I
0.000
orange1.1g014660m.g
Citrus sinensis
orange1.1g014660m.g
I
0.000
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
0.000
orange1.1g036551m.g
Citrus sinensis
orange1.1g036551m.g
I
0.000
ORGLA01G0206000
Oryza glaberrima
ORGLA01G0206000
I
0.000
ORGLA05G0227800
Oryza glaberrima
ORGLA05G0227800
I
0.000
ORGLA12G0063500
Oryza glaberrima
ORGLA12G0063500
I
0.000
ORUFI01G28110
Oryza rufipogon
ORUFI01G28110
I
0.000
ORUFI05G28170
Oryza rufipogon
ORUFI05G28170
I
0.000
ORUFI07G07050
Oryza rufipogon
ORUFI07G07050
I
0.000
ORUFI12G07600
Oryza rufipogon
ORUFI12G07600
I
0.000
OS01G0658900
Oryza sativa
OS01G0658900
I
0.000
OS05G0569300
Oryza sativa
OS05G0569300
I
0.000
OS07G0209800
Oryza sativa
OS07G0209800
I
0.000
Pavir.Aa03436
Panicum virgatum
Pavir.Aa03436
I
0.000
Pavir.Ab00132
Panicum virgatum
Pavir.Ab00132
I
0.000
Pavir.Ba03287
Panicum virgatum
Pavir.Ba03287
I
0.000
Pavir.Bb00931
Panicum virgatum
Pavir.Bb00931
I
0.000
Pavir.Ca00403
Panicum virgatum
Pavir.Ca00403
I
0.000
Pavir.Ca00968
Panicum virgatum
Pavir.Ca00968
I
0.000
Pavir.Cb01814
Panicum virgatum
Pavir.Cb01814
I
0.000
Pavir.Ea02315
Panicum virgatum
Pavir.Ea02315
I
0.000
Pavir.J01411
Panicum virgatum
Pavir.J01411
I
0.000
PDK_20s1310372g001
Phoenix dactylifera
PDK_20s1310372g001
I
0.000
PDK_20s1349941g001
Phoenix dactylifera
PDK_20s1349941g001
I
0.000
PDK_20s1368181g001
Phoenix dactylifera
PDK_20s1368181g001
I
0.000
PDK_20s1372692g002
Phoenix dactylifera
PDK_20s1372692g002
I
0.000
PDK_20s1708971g001
Phoenix dactylifera
PDK_20s1708971g001
I
0.000
PGSC0003DMG400000088
Solanum tuberosum
PGSC0003DMG400000088
I
0.000
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
0.000
PGSC0003DMG400018469
Solanum tuberosum
PGSC0003DMG400018469
I
0.000
PGSC0003DMG400033876
Solanum tuberosum
PGSC0003DMG400033876
I
0.000
PK07494.1
Cannabis sativa
PK07494.1
I
0.000
PK09653.1
Cannabis sativa
PK09653.1
D
0.000
PK23964.1
Cannabis sativa
PK23964.1
D
0.000
Pm018422
Prunus mume
Pm018422
I
0.000
Pm023132
Prunus mume
Pm023132
I
0.000
Pm024103
Prunus mume
Pm024103
I
0.000
Pm026586
Prunus mume
Pm026586
I
0.000
POPTR_0001s01840
Populus trichocarpa
POPTR_0001s01840
I
0.000
POPTR_0002s16870
Populus trichocarpa
POPTR_0002s16870
I
0.000
POPTR_0003s09630
Populus trichocarpa
POPTR_0003s09630
I
0.000
POPTR_0005s12750
Populus trichocarpa
POPTR_0005s12750
I
0.000
POPTR_0007s12460
Populus trichocarpa
POPTR_0007s12460
I
0.000
POPTR_0014s08990
Populus trichocarpa
POPTR_0014s08990
I
0.000
PRUPE_ppa006173mg
Prunus persica
PRUPE_ppa006173mg
I
0.000
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
0.000
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
0.000
PRUPE_ppa020524mg
Prunus persica
PRUPE_ppa020524mg
I
0.000
Q40645_ORYSA
Oryza sativa
Q40645_ORYSA
D
0.000
Q41109_PHAVU
Phaseolus vulgaris
Q41109_PHAVU
D
0.000
SapurV1A.0013s0770
Salix purpurea
SapurV1A.0013s0770
I
0.000
SapurV1A.0051s0250
Salix purpurea
SapurV1A.0051s0250
I
0.000
SapurV1A.0063s0130
Salix purpurea
SapurV1A.0063s0130
I
0.000
SapurV1A.0255s0070
Salix purpurea
SapurV1A.0255s0070
I
0.000
SapurV1A.0817s0110
Salix purpurea
SapurV1A.0817s0110
I
0.000
Sb02g006350
Sorghum bicolor
Sb02g006350
I
0.000
Sb03g030050
Sorghum bicolor
Sb03g030050
I
0.000
Sb04g002360
Sorghum bicolor
Sb04g002360
I
0.000
Sb08g008300
Sorghum bicolor
Sb08g008300
I
0.000
Sb09g028990
Sorghum bicolor
Sb09g028990
I
0.000
GBF1
Arabidopsis lyrata
scaffold_700433.1
I
0.000
SELMODRAFT_125734
Selaginella moellendorffii
SELMODRAFT_125734
I
0.000
SELMODRAFT_129391
Selaginella moellendorffii
SELMODRAFT_129391
I
0.000
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
0.000
Si001929m.g
Setaria italica
Si001929m.g
I
0.000
Si017637m.g
Setaria italica
Si017637m.g
I
0.000
Si022325m.g
Setaria italica
Si022325m.g
I
0.000
Si022388m.g
Setaria italica
Si022388m.g
I
0.000
Si030123m.g
Setaria italica
Si030123m.g
I
0.000
Solyc01g095460.2
Solanum lycopersicum
Solyc01g095460.2
I
0.000
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
0.000
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
0.000
Solyc05g050220.2
Solanum lycopersicum
Solyc05g050220.2
I
0.000
Solyc08g005290.2
Solanum lycopersicum
Solyc08g005290.2
I
0.000
Solyc08g076100.2
Solanum lycopersicum
Solyc08g076100.2
I
0.000
TAF1_TOBAC
Nicotiana tabacum
TAF1_TOBAC
D
0.000
TCM_000436
Theobroma cacao
TCM_000436
I
0.000
TCM_005210
Theobroma cacao
TCM_005210
I
0.000
TCM_016606
Theobroma cacao
TCM_016606
I
0.000
Thhalv10001533m.g
Eutrema salsugineum
Thhalv10001533m.g
I
0.000
Thhalv10007879m.g
Eutrema salsugineum
Thhalv10007879m.g
I
0.000
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
0.000
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
0.000
Thhalv10028761m.g
Eutrema salsugineum
Thhalv10028761m.g
I
0.000
Traes_1AL_F18EC96DF
Triticum aestivum
Traes_1AL_F18EC96DF
I
0.000
Traes_1BL_C5FEAF06E
Triticum aestivum
Traes_1BL_C5FEAF06E
I
0.000
Traes_1DL_23D036A85
Triticum aestivum
Traes_1DL_23D036A85
I
0.000
TRIUR3_18341
Triticum urartu
TRIUR3_18341
I
0.000
VIT_02s0012g02250
Vitis vinifera
VIT_02s0012g02250
I
0.000
VIT_02s0025g01020
Vitis vinifera
VIT_02s0025g01020
I
0.000
GBF1
Vitis vinifera
VIT_04s0023g01360
I
0.000
VIT_15s0046g01440
Vitis vinifera
VIT_15s0046g01440
I
0.000
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I
0.000