CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf011099m
(
Mimulus guttatus
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
mgf011099m
T181149_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf011099m
FAR1
52
128
EFYSAHANQVGFKIRIGQLYRSRSDGSVISRRFVCSKEGFQTNTRTGCAAFIRVQKADTGKWVIASIKKEHNHEFEA
mgf011099m
FAR1
205
281
KFYYAYASNIGFRIRIGQLFRSKHDGSITSRRFVCSKEGRQHPSRVGCGAYMRIQKQETGGWVVDRLQKEHNHEIDR
Links
Other
FAR1
family TFs
Other
Mimulus guttatus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FRS7
Arabidopsis thaliana
AT3G06250
N
0.706
FRS12
Arabidopsis thaliana
AT5G18960
N
0.725
Bo3g013440
Brassica oleracea
Bo3g013440
N
0.706
Bostr.2570s0035
Boechera stricta
Bostr.2570s0035
N
0.725
Bostr.26527s0315
Boechera stricta
Bostr.26527s0315
N
0.719
Cagra.0263s0023
Capsella grandiflora
Cagra.0263s0023
N
0.719
Cagra.3793s0006
Capsella grandiflora
Cagra.3793s0006
N
0.719
Carubv10000255m.g
Capsella rubella
Carubv10000255m.g
N
0.719
Carubv10013017m.g
Capsella rubella
Carubv10013017m.g
N
0.719
cassava1998.valid.m1
Manihot esculenta
cassava1998.valid.m1
N
0.739
Ciclev10004376m.g
Citrus clementina
Ciclev10004376m.g
N
0.740
evm.TU.supercontig_16.55
Carica papaya
evm.TU.supercontig_16.55
N
0.727
gene06133-v1.0-hybrid
Fragaria vesca
gene06133-v1.0-hybrid
N
0.701
Gorai.006G255400
Gossypium raimondii
Gorai.006G255400
N
0.712
mgf010461m
Mimulus guttatus
mgf010461m
N
0.870
orange1.1g004138m.g
Citrus sinensis
orange1.1g004138m.g
N
0.734
PK22885.1
Cannabis sativa
PK22885.1
N
0.712
POPTR_0008s20380
Populus trichocarpa
POPTR_0008s20380
N
0.701
POPTR_0010s03000
Populus trichocarpa
POPTR_0010s03000
N
0.701
Solyc10g084220.1
Solanum lycopersicum
Solyc10g084220.1
N
0.727
TCM_021065
Theobroma cacao
TCM_021065
N
0.714
Thhalv10012731m.g
Eutrema salsugineum
Thhalv10012731m.g
N
0.725
Thhalv10020128m.g
Eutrema salsugineum
Thhalv10020128m.g
N
0.725