Cagra.0263s0023 (Capsella grandiflora)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Cagra.0263s0023 T181246_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0263s0023.1.p FAR1 57 132
Cagra.0263s0023.1.p FAR1 224 300

Links

Other FAR1 family TFs
Other Capsella grandiflora TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10000255m.g Capsella rubella Carubv10000255m.g N 1.000
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N 0.993
FRS12 Arabidopsis thaliana AT5G18960 N 0.987
Bo3g013440 Brassica oleracea Bo3g013440 N 0.974
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N 0.974
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N 0.967
FRS7 Arabidopsis thaliana AT3G06250 N 0.961
Bostr.2570s0035 Boechera stricta Bostr.2570s0035 N 0.954
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N 0.954
Carubv10013017m.g Capsella rubella Carubv10013017m.g N 0.954
TCM_021065 Theobroma cacao TCM_021065 N 0.856
evm.TU.supercontig_16.55 Carica papaya evm.TU.supercontig_16.55 N 0.856
Gorai.006G255400 Gossypium raimondii Gorai.006G255400 N 0.824
cassava1998.valid.m1 Manihot esculenta cassava1998.valid.m1 N 0.810
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N 0.804
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N 0.799
orange1.1g004138m.g Citrus sinensis orange1.1g004138m.g N 0.799
PK22885.1 Cannabis sativa PK22885.1 N 0.797
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N 0.778
MDP0000295749 Malus domestica MDP0000295749 N 0.771
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N 0.766
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N 0.765
Pm008044 Prunus mume Pm008044 N 0.765
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N 0.765
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N 0.765
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N 0.758
MDP0000254218 Malus domestica MDP0000254218 N 0.753
GLYMA13G28230 Glycine max GLYMA13G28230 N 0.752
Cucsa.253860 Cucumis sativus Cucsa.253860 N 0.740
GLYMA15G10830 Glycine max GLYMA15G10830 N 0.725
mgf010461m Mimulus guttatus mgf010461m N 0.725
mgf011099m Mimulus guttatus mgf011099m N 0.719