orange1.1g004138m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g004138m.g T181614_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g004138m FAR1 59 135
orange1.1g004138m FAR1 210 286

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N 0.987
TCM_021065 Theobroma cacao TCM_021065 N 0.844
evm.TU.supercontig_16.55 Carica papaya evm.TU.supercontig_16.55 N 0.831
cassava1998.valid.m1 Manihot esculenta cassava1998.valid.m1 N 0.824
Gorai.006G255400 Gossypium raimondii Gorai.006G255400 N 0.818
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N 0.812
FRS12 Arabidopsis thaliana AT5G18960 N 0.805
Bostr.2570s0035 Boechera stricta Bostr.2570s0035 N 0.799
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N 0.799
Cagra.0263s0023 Capsella grandiflora Cagra.0263s0023 N 0.799
Carubv10000255m.g Capsella rubella Carubv10000255m.g N 0.799
FRS7 Arabidopsis thaliana AT3G06250 N 0.797
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N 0.797
Bo3g013440 Brassica oleracea Bo3g013440 N 0.792
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N 0.792
PK22885.1 Cannabis sativa PK22885.1 N 0.792
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N 0.786
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N 0.786
Carubv10013017m.g Capsella rubella Carubv10013017m.g N 0.786
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N 0.779
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N 0.760
Pm008044 Prunus mume Pm008044 N 0.760
Cucsa.253860 Cucumis sativus Cucsa.253860 N 0.760
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N 0.760
MDP0000295749 Malus domestica MDP0000295749 N 0.760
MDP0000254218 Malus domestica MDP0000254218 N 0.753
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N 0.753
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N 0.753
GLYMA13G28230 Glycine max GLYMA13G28230 N 0.740
mgf010461m Mimulus guttatus mgf010461m N 0.740
mgf011099m Mimulus guttatus mgf011099m N 0.734
GLYMA15G10830 Glycine max GLYMA15G10830 N 0.727
Solyc10g084220.1 Solanum lycopersicum Solyc10g084220.1 N 0.714