Pavir.Ab02304 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Ab02304 T181666_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab02304.1.p FAR1 104 188

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004656.1 Alligator sinensis Alligator_sinensis_CCG004656.1 I
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I
B39674 Xenopus laevis B39674 I
ENSAMEG00000000235 Ailuropoda melanoleuca ENSAMEG00000000235 I
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I
ENSAMXG00000010483 Astyanax mexicanus ENSAMXG00000010483 N
ENSAMXG00000012300 Astyanax mexicanus ENSAMXG00000012300 N
USF2 Bos taurus ENSBTAG00000017035 I
USF1 Bos taurus ENSBTAG00000017873 I
USF2 Canis familiaris ENSCAFG00000007054 I
USF1 Canis familiaris ENSCAFG00000012689 I
USF1 Choloepus hoffmanni ENSCHOG00000011010 I
USF1 Callithrix jacchus ENSCJAG00000005396 I
USF2 Callithrix jacchus ENSCJAG00000010451 I
USF1 Cavia porcellus ENSCPOG00000003957 I
USF2 Cavia porcellus ENSCPOG00000012147 I
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I
ENSCSAG00000004521 Chlorocebus sabaeus ENSCSAG00000004521 I
usf1 Danio rerio ENSDARG00000041689 N
USF2 Dasypus novemcinctus ENSDNOG00000003072 I
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I
USF1 Equus caballus ENSECAG00000004755 I
USF2 Equus caballus ENSECAG00000008583 I
USF2 Felis catus ENSFCAG00000008894 I
USF1 Felis catus ENSFCAG00000012307 I
USF2 Homo sapiens ENSG00000105698 D
USF1 Homo sapiens ENSG00000158773 D
usf2 Gasterosteus aculeatus ENSGACG00000002481 N
usf1 Gasterosteus aculeatus ENSGACG00000005115 I
USF1 Gorilla gorilla ENSGGOG00000003935 I
USF1 Loxodonta africana ENSLAFG00000011338 I
USF2 Loxodonta africana ENSLAFG00000029360 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I
USF2 Microcebus murinus ENSMICG00000001519 I
USF1 Microcebus murinus ENSMICG00000007199 I
USF1 Myotis lucifugus ENSMLUG00000009179 I
USF1 Macaca mulatta ENSMMUG00000002003 I
USF2 Macaca mulatta ENSMMUG00000011291 I
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I
USF1 Monodelphis domestica ENSMODG00000005443 I
ENSMPUG00000007099 Mustela putorius furo ENSMPUG00000007099 I
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I
Usf1 Mus musculus ENSMUSG00000026641 D
Usf2 Mus musculus ENSMUSG00000058239 D
ENSNLEG00000011114 Nomascus leucogenys ENSNLEG00000011114 I
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I
ENSOARG00000004745 Ovis aries ENSOARG00000004745 I
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I
USF2 Oryctolagus cuniculus ENSOCUG00000026259 I
USF2 Otolemur garnettii ENSOGAG00000001476 I
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I
ENSONIG00000013775 Oreochromis niloticus ENSONIG00000013775 N
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
USF1 Ochotona princeps ENSOPRG00000003858 I
usf1 Oryzias latipes ENSORLG00000015402 I
ENSP00000222305-D1 Bos grunniens ENSP00000222305-D1 I
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I
ENSPANG00000011040 Papio anubis ENSPANG00000011040 I
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I
USF2 Procavia capensis ENSPCAG00000013941 I
ENSPMAG00000009581 Petromyzon marinus ENSPMAG00000009581 N
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I
ENSPPYG00000009855 Pongo abelii ENSPPYG00000009855 I
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I
USF1 Pan troglodytes ENSPTRG00000001565 I
USF2 Pan troglodytes ENSPTRG00000010836 I
USF2 Pteropus vampyrus ENSPVAG00000004161 I
USF1 Pteropus vampyrus ENSPVAG00000005489 I
Usf1 Rattus norvegicus ENSRNOG00000004255 I
Usf2 Rattus norvegicus ENSRNOG00000053725 I
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I
USF2 Sus scrofa ENSSSCG00000002885 I
USF1 Sus scrofa ENSSSCG00000006371 I
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I
ENSSTOG00000022219 Ictidomys tridecemlineatus ENSSTOG00000022219 I
USF1 Tupaia belangeri ENSTBEG00000003164 I
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I
usf1 Takifugu rubripes ENSTRUG00000005343 I
USF1 Tursiops truncatus ENSTTRG00000009151 I
USF1 Vicugna pacos ENSVPAG00000008421 I
Ogr08237 Ophisaurus gracilis Ogr08237 I
PHUM287950 Pediculus humanus PHUM287950 I
Pvit_07548 Pogona vitticeps Pvit_07548 I
usf1 Xenopus tropicalis XB-GENE-5918718 I
usf1.S Xenopus laevis XB-GENE-6255904 I