CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0407s0270
(
Salix purpurea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
SapurV1A.0407s0270
T181923_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0407s0270.1.p
FAR1
112
188
QFYNVYATRVGFRTRTGQLYRSRTDGSVSSRRFVCSKEGFQLSSRTGCPAFIRVQRRDSGKWVIDQMHKDHNHQLGD
SapurV1A.0407s0270.1.p
FAR1
265
341
NFYVRYADEAGFKTRIGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGCGAFMRIKRQESGTWMVDRLQKDHNHDLEP
Links
Other
FAR1
family TFs
Other
Salix purpurea
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FRS7
Arabidopsis thaliana
AT3G06250
N
0.786
FRS12
Arabidopsis thaliana
AT5G18960
N
0.773
Bo3g013440
Brassica oleracea
Bo3g013440
N
0.766
Bostr.2570s0035
Boechera stricta
Bostr.2570s0035
N
0.786
Bostr.26527s0315
Boechera stricta
Bostr.26527s0315
N
0.766
Cagra.0263s0023
Capsella grandiflora
Cagra.0263s0023
N
0.766
Cagra.3793s0006
Capsella grandiflora
Cagra.3793s0006
N
0.773
Carubv10000255m.g
Capsella rubella
Carubv10000255m.g
N
0.766
Carubv10013017m.g
Capsella rubella
Carubv10013017m.g
N
0.773
cassava1998.valid.m1
Manihot esculenta
cassava1998.valid.m1
N
0.856
Ciclev10004376m.g
Citrus clementina
Ciclev10004376m.g
N
0.779
Cucsa.253860
Cucumis sativus
Cucsa.253860
N
0.805
evm.TU.supercontig_16.55
Carica papaya
evm.TU.supercontig_16.55
N
0.818
gene06133-v1.0-hybrid
Fragaria vesca
gene06133-v1.0-hybrid
N
0.753
GLYMA13G28230
Glycine max
GLYMA13G28230
N
0.766
GLYMA15G10830
Glycine max
GLYMA15G10830
N
0.760
Gorai.006G255400
Gossypium raimondii
Gorai.006G255400
N
0.799
MDP0000254218
Malus domestica
MDP0000254218
N
0.773
MDP0000295749
Malus domestica
MDP0000295749
N
0.779
mgf010461m
Mimulus guttatus
mgf010461m
N
0.714
orange1.1g004138m.g
Citrus sinensis
orange1.1g004138m.g
N
0.779
PK22885.1
Cannabis sativa
PK22885.1
N
0.779
Pm008044
Prunus mume
Pm008044
N
0.812
POPTR_0008s20380
Populus trichocarpa
POPTR_0008s20380
N
0.981
POPTR_0010s03000
Populus trichocarpa
POPTR_0010s03000
N
0.909
PRUPE_ppa001884mg
Prunus persica
PRUPE_ppa001884mg
N
0.812
SapurV1A.0152s0560
Salix purpurea
SapurV1A.0152s0560
N
0.909
SapurV1A.1026s0020
Salix purpurea
SapurV1A.1026s0020
N
0.909
Solyc10g084220.1
Solanum lycopersicum
Solyc10g084220.1
N
0.753
TCM_021065
Theobroma cacao
TCM_021065
N
0.812
Thhalv10012731m.g
Eutrema salsugineum
Thhalv10012731m.g
N
0.771
Thhalv10020128m.g
Eutrema salsugineum
Thhalv10020128m.g
N
0.792