CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FOXN4
(
Bos taurus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSBTAG00000010847
T185243_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.845
0.953
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.806
0.884
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.806
0.872
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.786
0.733
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000014397
Forkhead
195
285
KPIYSYSCLIAMALKNSKTGSLPVSEIYSFMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNLARIDKMEEEMH
Links
Other
Forkhead
family TFs
Other
Bos taurus
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29801.m003200
Ricinus communis
29801.m003200
N
AT3G19184
Arabidopsis thaliana
AT3G19184
N
Bostr.19424s0744
Boechera stricta
Bostr.19424s0744
N
Bra035129
Brassica rapa
Bra035129
N
BRADI1G45517
Brachypodium distachyon
BRADI1G45517
N
Cagra.5742s0010
Capsella grandiflora
Cagra.5742s0010
N
Carubv10014420m.g
Capsella rubella
Carubv10014420m.g
N
Ciclev10002314m.g
Citrus clementina
Ciclev10002314m.g
N
Ciclev10029072m.g
Citrus clementina
Ciclev10029072m.g
N
Cla016258
Citrullus lanatus
Cla016258
N
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
F775_06135
Aegilops tauschii
F775_06135
N
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
Gorai.002G131600
Gossypium raimondii
Gorai.002G131600
N
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
LPERR06G05590
Leersia perrieri
LPERR06G05590
N
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
mgf008645m
Mimulus guttatus
mgf008645m
N
orange1.1g026276m.g
Citrus sinensis
orange1.1g026276m.g
N
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
PK25650.1
Cannabis sativa
PK25650.1
N
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
PRUPE_ppb024440mg
Prunus persica
PRUPE_ppb024440mg
N
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
Sb07g006170
Sorghum bicolor
Sb07g006170
N
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
Traes_7BS_9D1E05CB7
Triticum aestivum
Traes_7BS_9D1E05CB7
N
Traes_7DS_A234A13E1
Triticum aestivum
Traes_7DS_A234A13E1
N