CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXN4
(
Tursiops truncatus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSTTRG00000006397
T187309_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.845
0.953
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.806
0.884
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.806
0.872
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.786
0.733
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000006054
Forkhead
191
281
KPIYSYSCLIAMALKNSKTGSLPVSEIYSFMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGSSRKGCLWALNLARIDKMEEEMH
Links
Other
Forkhead
family TFs
Other
Tursiops truncatus
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27805.m000021
Ricinus communis
27805.m000021
I
28118.m000034
Ricinus communis
28118.m000034
I
ERF022
Arabidopsis thaliana
AT1G33760
I
ERF021
Arabidopsis thaliana
AT1G71450
D
Bo2g072910
Brassica oleracea
Bo2g072910
I
Bo5g086680
Brassica oleracea
Bo5g086680
I
Bo6g094210
Brassica oleracea
Bo6g094210
I
Bo6g113020
Brassica oleracea
Bo6g113020
I
Bo8g027240
Brassica oleracea
Bo8g027240
I
Bostr.10273s0203
Boechera stricta
Bostr.10273s0203
I
Bostr.3359s0006
Boechera stricta
Bostr.3359s0006
I
Bra007975
Brassica rapa
Bra007975
I
Bra010210
Brassica rapa
Bra010210
I
Bra016136
Brassica rapa
Bra016136
I
Cagra.2418s0001
Capsella grandiflora
Cagra.2418s0001
I
Carubv10012215m.g
Capsella rubella
Carubv10012215m.g
I
Carubv10022349m.g
Capsella rubella
Carubv10022349m.g
I
cassava43172.valid.m1
Manihot esculenta
cassava43172.valid.m1
I
cassava8552.m1
Manihot esculenta
cassava8552.m1
I
chr2.CM0018.470.nd
Lotus japonicus
chr2.CM0018.470.nd
I
chr2.CM0018.610.nd
Lotus japonicus
chr2.CM0018.610.nd
I
Ciclev10023857m.g
Citrus clementina
Ciclev10023857m.g
I
Ciclev10024063m.g
Citrus clementina
Ciclev10024063m.g
I
Cla012665
Citrullus lanatus
Cla012665
I
Cucsa.237150
Cucumis sativus
Cucsa.237150
I
Eucgr.F02974
Eucalyptus grandis
Eucgr.F02974
I
Eucgr.F02975
Eucalyptus grandis
Eucgr.F02975
I
evm.TU.supercontig_21.69
Carica papaya
evm.TU.supercontig_21.69
I
evm.TU.supercontig_21.70
Carica papaya
evm.TU.supercontig_21.70
I
fgenesh2_kg.2__1406__AT1G71450.1
Arabidopsis lyrata
fgenesh2_kg.2__1406__AT1G71450.1
I
gene27017-v1.0-hybrid
Fragaria vesca
gene27017-v1.0-hybrid
I
gene27021-v1.0-hybrid
Fragaria vesca
gene27021-v1.0-hybrid
I
GLYMA01G44140
Glycine max
GLYMA01G44140
I
GLYMA11G01640
Glycine max
GLYMA11G01640
I
Gorai.005G116500
Gossypium raimondii
Gorai.005G116500
I
Gorai.009G266600
Gossypium raimondii
Gorai.009G266600
I
Gorai.009G266700
Gossypium raimondii
Gorai.009G266700
I
Lus10006173.g
Linum usitatissimum
Lus10006173.g
I
Lus10041050.g
Linum usitatissimum
Lus10041050.g
I
MDP0000283350
Malus domestica
MDP0000283350
I
MTR_5g008550
Medicago truncatula
MTR_5g008550
I
MTR_5g008590
Medicago truncatula
MTR_5g008590
I
orange1.1g035756m.g
Citrus sinensis
orange1.1g035756m.g
I
orange1.1g046901m.g
Citrus sinensis
orange1.1g046901m.g
I
PGSC0003DMG400017813
Solanum tuberosum
PGSC0003DMG400017813
I
PGSC0003DMG400018054
Solanum tuberosum
PGSC0003DMG400018054
I
Pm004269
Prunus mume
Pm004269
I
Pm004272
Prunus mume
Pm004272
I
POPTR_0001s18180
Populus trichocarpa
POPTR_0001s18180
I
POPTR_0013s10340
Populus trichocarpa
POPTR_0013s10340
I
POPTR_0019s10420
Populus trichocarpa
POPTR_0019s10420
I
PRUPE_ppa012354mg
Prunus persica
PRUPE_ppa012354mg
I
SapurV1A.0551s0030
Salix purpurea
SapurV1A.0551s0030
I
SapurV1A.1130s0100
Salix purpurea
SapurV1A.1130s0100
I
SapurV1A.1331s0040
Salix purpurea
SapurV1A.1331s0040
I
Solyc11g042560.1
Solanum lycopersicum
Solyc11g042560.1
I
Solyc11g042580.1
Solanum lycopersicum
Solyc11g042580.1
I
TCM_036269
Theobroma cacao
TCM_036269
I
TCM_036270
Theobroma cacao
TCM_036270
I
Thhalv10010002m.g
Eutrema salsugineum
Thhalv10010002m.g
I
Thhalv10019659m.g
Eutrema salsugineum
Thhalv10019659m.g
I
VIT_18s0001g05850
Vitis vinifera
VIT_18s0001g05850
I
VIT_18s0001g05890
Vitis vinifera
VIT_18s0001g05890
I