CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB41890
(
Apis mellifera
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
GB41890
T187661_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.854
0.814
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.776
0.802
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.776
0.814
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.776
0.802
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB41890-PA
Forkhead
354
445
KPAYSYSCLIAMALKNSQTGSLPVSEIYNFMCEHFPYFKTAPNGWKNSVRHNLSLNKCFEKIEKPAGNGNQRKGCLWAINPAKVAKMDEEVQ
Links
Other
Forkhead
family TFs
Other
Apis mellifera
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006306
Ricinus communis
30169.m006306
N
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
evm.TU.supercontig_34.30
Carica papaya
evm.TU.supercontig_34.30
N
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
Gorai.002G110100
Gossypium raimondii
Gorai.002G110100
N
Lus10031748.g
Linum usitatissimum
Lus10031748.g
N
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
PK21020.1
Cannabis sativa
PK21020.1
N
Pm011106
Prunus mume
Pm011106
N
POPTR_0005s09790
Populus trichocarpa
POPTR_0005s09790
N
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
SapurV1A.0404s0280
Salix purpurea
SapurV1A.0404s0280
N
TCM_033446
Theobroma cacao
TCM_033446
N
VIT_19s0085g00540
Vitis vinifera
VIT_19s0085g00540
N