Pavir.Eb04066 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.Eb04066 T196742_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.811 0.833
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb04066.1.p GATA 36 71

Links

Other GATA family TFs
Other Panicum virgatum TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16568_YMR042W Saccharomyces mikatae 16568_YMR042W I 0.000
16570_YMR043W Saccharomyces mikatae 16570_YMR043W I 0.000
17142_YMR043W Saccharomyces paradoxus 17142_YMR043W I 0.000
17148_YMR042W Saccharomyces paradoxus 17148_YMR042W I 0.000
18568_YMR043W Saccharomyces bayanus 18568_YMR043W I 0.000
AACERI_AaceriABR098C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR098C I 0.000
AEPI007009 Anopheles epiroticus AEPI007009 I 0.000
AFUN006149 Anopheles funestus AFUN006149 I 0.000
AGOS_ABR098C Ashbya gossypii AGOS_ABR098C I 0.000
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I 0.000
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I 0.000
CAGL0F06237g Candida glabrata CAGL0F06237g I 0.000
CAGL0F06259g Candida glabrata CAGL0F06259g I 0.000
CAGL0I10769g Candida glabrata CAGL0I10769g I 0.000
CANTEDRAFT_132918 Candida tenuis CANTEDRAFT_132918 I 0.000
Ecym_2292 Eremothecium cymbalariae Ecym_2292 I 0.000
estExt_fgeneshMC_pm.C_40429 Mucor circinelloides estExt_fgeneshMC_pm.C_40429 I 0.000
e_gw1.1.687.1 Phycomyces blakesleeanus e_gw1.1.687.1 I 0.000
e_gw1.4.1161.1 Mucor circinelloides e_gw1.4.1161.1 I 0.000
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I 0.000
fgeneshPB_pg.1__662 Phycomyces blakesleeanus fgeneshPB_pg.1__662 I 0.000
gw1.27.105.1 Phycomyces blakesleeanus gw1.27.105.1 I 0.000
gw1.3.516.1 Phycomyces blakesleeanus gw1.3.516.1 I 0.000
gw1.5.917.1 Mucor circinelloides gw1.5.917.1 I 0.000
gw1.8.565.1 Mucor circinelloides gw1.8.565.1 I 0.000
H311_00382 Anncaliia algerae H311_00382 I 0.000
KAFR_0A03700 Kazachstania africana KAFR_0A03700 I 0.000
KAFR_0B05280 Kazachstania africana KAFR_0B05280 I 0.000
KAFR_0B05290 Kazachstania africana KAFR_0B05290 I 0.000
KLLA0_F26807g Kluyveromyces lactis KLLA0_F26807g I 0.000
KLTH0B04026g Lachancea thermotolerans KLTH0B04026g I 0.000
KLTH0B04026g Kluyveromyces thermotolerans KLTH0B04026g I 0.000
KNAG_0H00480 Kazachstania naganishii KNAG_0H00480 I 0.000
KNAG_0M02350 Kazachstania naganishii KNAG_0M02350 I 0.000
Kpol_1073p26 Vanderwaltozyma polyspora Kpol_1073p26 I 0.000
Kpol_262p3 Vanderwaltozyma polyspora Kpol_262p3 I 0.000
Kwal_15001 Kluyveromyces waltii Kwal_15001 I 0.000
LALA0_S06e03510g Lachancea lanzarotensis LALA0_S06e03510g I 0.000
LDEC007646 Leptinotarsa decemlineata LDEC007646 I 0.000
NCAS_0A12960 Naumovozyma castellii NCAS_0A12960 I 0.000
NCAS_0A12970 Naumovozyma castellii NCAS_0A12970 I 0.000
NCAS_0H03140 Naumovozyma castellii NCAS_0H03140 I 0.000
NDAI_0B01280 Naumovozyma dairenensis NDAI_0B01280 I 0.000
NDAI_0B01290 Naumovozyma dairenensis NDAI_0B01290 I 0.000
NDAI_0C00510 Naumovozyma dairenensis NDAI_0C00510 I 0.000
PNEG_00576 Pneumocystis murina PNEG_00576 I 0.000
PredSwiss_ASS2010_3106.1 Pneumocystis carinii PredSwiss_ASS2010_3106.1 I 0.000
PredSwiss_CON2646.1 Pneumocystis carinii PredSwiss_CON2646.1 I 0.000
PredSwiss_CON3093.1 Pneumocystis carinii PredSwiss_CON3093.1 I 0.000
RO3G_06121 Rhizopus oryzae RO3G_06121 I 0.000
RO3G_11614 Rhizopus oryzae RO3G_11614 I 0.000
RO3G_15079 Rhizopus oryzae RO3G_15079 I 0.000
SAKL0B11704g Lachancea kluyveri SAKL0B11704g I 0.000
Scas_Contig649.23 Saccharomyces castellii Scas_Contig649.23 I 0.000
Scas_Contig709.26 Saccharomyces castellii Scas_Contig709.26 I 0.000
Scas_Contig709.27 Saccharomyces castellii Scas_Contig709.27 I 0.000
SKUD_077902 Saccharomyces kudriavzevii SKUD_077902 I 0.000
SNOG_07763 Stagonospora nodorum SNOG_07763 I 0.000
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I 0.000
SU7_2521 Saccharomyces arboricola SU7_2521 I 0.000
TBLA_0B06860 Tetrapisispora blattae TBLA_0B06860 I 0.000
TBLA_0G01960 Tetrapisispora blattae TBLA_0G01960 I 0.000
TDEL_0B07000 Torulaspora delbrueckii TDEL_0B07000 I 0.000
TDEL_0B07010 Torulaspora delbrueckii TDEL_0B07010 I 0.000
TPHA_0C02530 Tetrapisispora phaffii TPHA_0C02530 I 0.000
TPHA_0N01520 Tetrapisispora phaffii TPHA_0N01520 I 0.000
ARG80 Saccharomyces cerevisiae YMR042W D 0.000
MCM1 Saccharomyces cerevisiae YMR043W D 0.000
ZBAI_03536 Zygosaccharomyces bailii ZBAI_03536 I 0.000
ZBAI_03537 Zygosaccharomyces bailii ZBAI_03537 I 0.000
ZBAI_08534 Zygosaccharomyces bailii ZBAI_08534 I 0.000
ZBAI_08535 Zygosaccharomyces bailii ZBAI_08535 I 0.000
ZYRO0F00726g Zygosaccharomyces rouxii ZYRO0F00726g I 0.000
ZYRO0F00748g Zygosaccharomyces rouxii ZYRO0F00748g I 0.000