CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb01g050333
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb01g050333
T201322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g050333.1
GRAS
47
316
AVDQLAEAARLAEAGDVLGAREILARLNYLLPPAGATATPLLRSAFYFKEALRAALSTTTTAAAADASSSPVDVLLKLGAYKAFSEVCPVLQFAHFTCVQAVLDELGGAACIHVLDFDIGVGEQWASLMQELARRRPGPGPTLKVTALVSTASQSHHHHPLELQLVHENLSNFAAETRVPFQLAFFNLDAMDPAELVSIAAGDAVAVHLPAGSVHTPAVPSVLHLVRRLGAKLVVSVDYRSCDRGELPFAAHLFQAFQSCVFLLESLDAV
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr1.CM0544.480.nd
Lotus japonicus
chr1.CM0544.480.nd
N
gene05925-v1.0-hybrid
Fragaria vesca
gene05925-v1.0-hybrid
N
Gorai.005G040900
Gossypium raimondii
Gorai.005G040900
N
Lus10021934.g
Linum usitatissimum
Lus10021934.g
N
MDP0000539118
Malus domestica
MDP0000539118
N
MDP0000699761
Malus domestica
MDP0000699761
N
Pm008000
Prunus mume
Pm008000
N
POPTR_0010s03730
Populus trichocarpa
POPTR_0010s03730
N
PRUPE_ppa010187mg
Prunus persica
PRUPE_ppa010187mg
N
SapurV1A.0022s0280
Salix purpurea
SapurV1A.0022s0280
N
SapurV1A.0656s0120
Salix purpurea
SapurV1A.0656s0120
N
TCM_020537
Theobroma cacao
TCM_020537
N
VIT_05s0020g02790
Vitis vinifera
VIT_05s0020g02790
N