CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa010187mg
(
Prunus persica
)
ABF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04684 (BAF1_ABF1)
IPR006774
PRUPE_ppa010187mg
T000067_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ24685
ABF1
40
169
GSVGLMQSPTQPAGPPASSQLAQHQLAYQHIHQQQQQQLQQQLQSFWAEQYQEIEAVMDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRT
Links
Other
ABF1
family TFs
Other
Prunus persica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm008000
Prunus mume
Pm008000
N
1.000
gene05925-v1.0-hybrid
Fragaria vesca
gene05925-v1.0-hybrid
N
0.881
VIT_05s0020g02790
Vitis vinifera
VIT_05s0020g02790
N
0.873
MDP0000539118
Malus domestica
MDP0000539118
N
0.838
MDP0000699761
Malus domestica
MDP0000699761
N
0.838
SapurV1A.0656s0120
Salix purpurea
SapurV1A.0656s0120
N
0.788
SapurV1A.0022s0280
Salix purpurea
SapurV1A.0022s0280
N
0.780
Lus10021934.g
Linum usitatissimum
Lus10021934.g
N
0.756
chr1.CM0544.480.nd
Lotus japonicus
chr1.CM0544.480.nd
N
0.720
TCM_020537
Theobroma cacao
TCM_020537
N
0.717
POPTR_0010s03730
Populus trichocarpa
POPTR_0010s03730
N
0.712