TCM_020537 (Theobroma cacao)
ABF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04684 (BAF1_ABF1) IPR006774 TCM_020537 T000075_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY05562 ABF1 33 170
EOY05563 ABF1 33 170

Links

Other ABF1 family TFs
Other Theobroma cacao TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G040900 Gossypium raimondii Gorai.005G040900 N 0.880
POPTR_0010s03730 Populus trichocarpa POPTR_0010s03730 N 0.874
SapurV1A.0022s0280 Salix purpurea SapurV1A.0022s0280 N 0.874
SapurV1A.0656s0120 Salix purpurea SapurV1A.0656s0120 N 0.866
VIT_05s0020g02790 Vitis vinifera VIT_05s0020g02790 N 0.772
chr1.CM0544.480.nd Lotus japonicus chr1.CM0544.480.nd N 0.772
gene05925-v1.0-hybrid Fragaria vesca gene05925-v1.0-hybrid N 0.748
MDP0000539118 Malus domestica MDP0000539118 N 0.738
MDP0000699761 Malus domestica MDP0000699761 N 0.738
PRUPE_ppa010187mg Prunus persica PRUPE_ppa010187mg N 0.717
Pm008000 Prunus mume Pm008000 N 0.717
Lus10021934.g Linum usitatissimum Lus10021934.g N 0.709
PGSC0003DMG400003357 Solanum tuberosum PGSC0003DMG400003357 N 0.701