CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0656s0120
(
Salix purpurea
)
ABF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04684 (BAF1_ABF1)
IPR006774
SapurV1A.0656s0120
T000105_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0656s0120.1.p
ABF1
26
167
TSYQPNQIMGPSATGSVQSPTQPAVLAATSNQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRT
SapurV1A.0656s0120.2.p
ABF1
26
167
TSYQPNQIMGPSATGSVQSPTQPAVLAATSNQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRT
Links
Other
ABF1
family TFs
Other
Salix purpurea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0010s03730
Populus trichocarpa
POPTR_0010s03730
N
0.917
TCM_020537
Theobroma cacao
TCM_020537
N
0.866
SapurV1A.0022s0280
Salix purpurea
SapurV1A.0022s0280
N
0.857
VIT_05s0020g02790
Vitis vinifera
VIT_05s0020g02790
N
0.828
chr1.CM0544.480.nd
Lotus japonicus
chr1.CM0544.480.nd
N
0.808
gene05925-v1.0-hybrid
Fragaria vesca
gene05925-v1.0-hybrid
N
0.800
PRUPE_ppa010187mg
Prunus persica
PRUPE_ppa010187mg
N
0.788
Pm008000
Prunus mume
Pm008000
N
0.788
Gorai.005G040900
Gossypium raimondii
Gorai.005G040900
N
0.782
Lus10021934.g
Linum usitatissimum
Lus10021934.g
N
0.773
MDP0000539118
Malus domestica
MDP0000539118
N
0.738
MDP0000699761
Malus domestica
MDP0000699761
N
0.738