CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000712
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm000712
T201944_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000712
GRAS
325
689
LWTLLTQCAQAVASYDIRTANEQLRQIRQHSSPYGDGTQRLAHYLANGLELRLAAGVPLNPEMSAADLLRAYQTYITACPFQKMSNFYANRTIAKLAEKATRLHIIDFGVLYGYQWPCLIQGLSNRHGGPPTLRITGVEFPQPGFRPSERVEATGRRLANYCKRFNVPFEYNVIAKNWETIQYEDIKIDRDELIVVNCLYRLKNLPDETVTESPRDTVLKLIRRINPDIFIHGVVNGSYNAPFFDTRFREALFHFSSLFDMFEETLPREDQQRLLFEKEVYGRDVINVIACEGSRRFERPETYKQWQFRNKRAGFRQLPLDQEILKKVRSMVTSEYHKDFVVDEDGMWVLQGWKGRIIHAISYWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28650.m000186
Ricinus communis
28650.m000186
N
0.708
28650.m000187
Ricinus communis
28650.m000187
N
0.725
cassava34368.m1
Manihot esculenta
cassava34368.m1
N
0.700
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.741
Ca_16293
Cicer arietinum
Ca_16293
N
0.716
chr3.CM0792.420.nd
Lotus japonicus
chr3.CM0792.420.nd
N
0.702
Eucgr.B02328
Eucalyptus grandis
Eucgr.B02328
N
0.705
GLYMA11G14670
Glycine max
GLYMA11G14670
N
0.705
GLYMA12G06630
Glycine max
GLYMA12G06630
N
0.708
MDP0000194661
Malus domestica
MDP0000194661
N
0.826
MTR_4g064200
Medicago truncatula
MTR_4g064200
N
0.708
PK01612.1
Cannabis sativa
PK01612.1
N
0.711
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.708
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.716
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.702
PRUPE_ppa021807mg
Prunus persica
PRUPE_ppa021807mg
N
0.983
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.702
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
0.708
TCM_041810
Theobroma cacao
TCM_041810
N
0.705