Carubv10015988m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10015988m.g T202356_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015988m GRAS 144 505

Links

Other GRAS family TFs
Other Capsella rubella TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N
GT-3B Arabidopsis thaliana AT2G38250 N
BGIOSGA014412 Oryza indica BGIOSGA014412 N
Bo3g032310 Brassica oleracea Bo3g032310 N
Bo4g029680 Brassica oleracea Bo4g029680 N
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N
Bra000046 Brassica rapa Bra000046 N
Bra005127 Brassica rapa Bra005127 N
Bra005688 Brassica rapa Bra005688 N
BRADI5G20847 Brachypodium distachyon BRADI5G20847 N
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N
Carubv10001432m.g Capsella rubella Carubv10001432m.g N
cassava39493.m1 Manihot esculenta cassava39493.m1 N
Ca_10636 Cicer arietinum Ca_10636 N
Ca_22200 Cicer arietinum Ca_22200 N
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N
gene27722-v1.0-hybrid Fragaria vesca gene27722-v1.0-hybrid N
GLYMA01G35370 Glycine max GLYMA01G35370 N
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N
Lus10004806.g Linum usitatissimum Lus10004806.g N
MTR_4g015680 Medicago truncatula MTR_4g015680 N
MTR_5g026540 Medicago truncatula MTR_5g026540 N
OGLUM04G24100 Oryza glumaepatula OGLUM04G24100 N
OMERI04G20000 Oryza meridionalis OMERI04G20000 N
ONIVA04G23310 Oryza nivara ONIVA04G23310 N
OPUNC04G21710 Oryza punctata OPUNC04G21710 N
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N
ORGLA04G0207300 Oryza glaberrima ORGLA04G0207300 N
ORUFI04G25870 Oryza rufipogon ORUFI04G25870 N
PK23483.1 Cannabis sativa PK23483.1 N
POPTR_0001s01210 Populus trichocarpa POPTR_0001s01210 N
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N