CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ia00281
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ia00281
T203018_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia00281.1.p
GRAS
276
647
LTTLLIHCAQAAAIDDHRNSNELLKQIRKHSSATGGAGQRLAHYFANGLEARLAGSGSTIYHQIAATRTCTGDILKAFGLYAKACPFMTISHYFANSNILNVSKSASRLHIIDYGIRYGFQYPVLMQRFSKRCGGSPSLRITGVDFPQPGFRPAERIEATGRRLHEYARMFNVPFEYHAIVGKWDTIQVEDLNINSDELLVVNCLYRMRNIMDETVTDDSPRTRVLNTIRKLNPHLFVHGVINGTYNAPFFVTRFKEAMFFFSSHFDMLEANASRMDEHRLLIEREYVGREALNVIACEGMERIERPETYKQWHMRNLRAGFRPLPLNKEVMKRARYKVSKSYHRDFLVDEDNKWMLQGWKGRVIFALSAWT
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003297
Ricinus communis
29983.m003297
I
cassava39895.m1
Manihot esculenta
cassava39895.m1
I
Ca_12172
Cicer arietinum
Ca_12172
I
Eucgr.I00022
Eucalyptus grandis
Eucgr.I00022
I
gene14755-v1.0-hybrid
Fragaria vesca
gene14755-v1.0-hybrid
I
GLYMA20G35690
Glycine max
GLYMA20G35690
I
Gorai.012G046200
Gossypium raimondii
Gorai.012G046200
I
GRMZM2G069365
Zea mays
GRMZM2G069365
I
Lus10015900.g
Linum usitatissimum
Lus10015900.g
I
mgf026503m
Mimulus guttatus
mgf026503m
I
Pavir.Aa00802
Panicum virgatum
Pavir.Aa00802
I
POPTR_0004s14270
Populus trichocarpa
POPTR_0004s14270
I
SapurV1A.0185s0100
Salix purpurea
SapurV1A.0185s0100
I
Sb04g030480
Sorghum bicolor
Sb04g030480
I
SELMODRAFT_49899
Selaginella moellendorffii
SELMODRAFT_49899
I
SELMODRAFT_59936
Selaginella moellendorffii
SELMODRAFT_59936
I
Si020227m.g
Setaria italica
Si020227m.g
I
Traes_4AL_5659286D11
Triticum aestivum
Traes_4AL_5659286D11
N