Si020227m.g (Setaria italica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Si020227m.g T223210_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.835 0.946
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si020227m Homeodomain 323 382

Links

Other Homeodomain family TFs
Other Setaria italica TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.860
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.855
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.855
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.838
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.835
ZHD7 Oryza sativa OS02G0706600 D 0.835
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.835
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.835
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.835
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.835
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.826
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.748
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.748
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.730
29983.m003297 Ricinus communis 29983.m003297 I 0.730
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.726
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.726
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.696
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.673
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.660
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.660
Ca_12172 Cicer arietinum Ca_12172 I 0.652
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.652
mgf026503m Mimulus guttatus mgf026503m I 0.651
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.644
Ca_02034 Cicer arietinum Ca_02034 I 0.642
MDP0000804580 Malus domestica MDP0000804580 I 0.639
TCM_001660 Theobroma cacao TCM_001660 I 0.638
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.638
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.629
mgf024641m Mimulus guttatus mgf024641m I 0.625
Pavir.J22932 Panicum virgatum Pavir.J22932 N 0.620
Traes_4AL_5659286D11 Triticum aestivum Traes_4AL_5659286D11 N 0.618