chr4.CM0288.500.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr4.CM0288.500.nc T203283_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0288.500.nc GRAS 170 541

Links

Other GRAS family TFs
Other Lotus japonicus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27529.m000047 Ricinus communis 27529.m000047 N 0.710
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.702
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.702
Ca_07887 Cicer arietinum Ca_07887 N 0.772
Ca_20223 Cicer arietinum Ca_20223 N 0.851
chr6.LjT16B20.120.nc Lotus japonicus chr6.LjT16B20.120.nc N 0.811
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N 0.737
Cla014623 Citrullus lanatus Cla014623 N 0.743
Cucsa.044690 Cucumis sativus Cucsa.044690 N 0.726
Eucgr.D01435 Eucalyptus grandis Eucgr.D01435 N 0.743
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.747
GLYMA07G39650 Glycine max GLYMA07G39650 N 0.848
GLYMA09G01440 Glycine max GLYMA09G01440 N 0.805
GLYMA15G12320 Glycine max GLYMA15G12320 N 0.808
GLYMA17G01150 Glycine max GLYMA17G01150 N 0.854
Gorai.009G184100 Gossypium raimondii Gorai.009G184100 N 0.734
Gorai.010G249400 Gossypium raimondii Gorai.010G249400 N 0.729
Lus10000539.g Linum usitatissimum Lus10000539.g N 0.718
Lus10017554.g Linum usitatissimum Lus10017554.g N 0.715
MDP0000254936 Malus domestica MDP0000254936 N 0.713
mgf007403m Mimulus guttatus mgf007403m N 0.702
MTR_2g026250 Medicago truncatula MTR_2g026250 N 0.707
MTR_4g133660 Medicago truncatula MTR_4g133660 N 0.832
orange1.1g008984m.g Citrus sinensis orange1.1g008984m.g N 0.734
PK04573.1 Cannabis sativa PK04573.1 N 0.710
Pm012494 Prunus mume Pm012494 N 0.743
POPTR_0016s01110 Populus trichocarpa POPTR_0016s01110 N 0.702
PRUPE_ppa003910mg Prunus persica PRUPE_ppa003910mg N 0.751
SapurV1A.0823s0110 Salix purpurea SapurV1A.0823s0110 N 0.702
TCM_030393 Theobroma cacao TCM_030393 N 0.751
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.718