ENSCING00000013609 (Ciona intestinalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCING00000013609 T207863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
acj6
M02241_2.00 		Drosophila melanogaster
VTMATTAA
TTAATKAB		 PBM
Weirauch et al.(2014)
pTH6053 		0.665 0.544
Pou1f1
M02238_2.00 		Mus musculus
NTAATKHNN
NNDMATTAN		 PBM
Weirauch et al.(2014)
pTH6507 		0.660 0.526
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.624 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000024918 Homeodomain 39 95

Links

Other Homeodomain family TFs
Other Ciona intestinalis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAM009961 Anopheles maculatus AMAM009961 I 0.791
AMAM021613 Anopheles maculatus AMAM021613 I 0.697
BGIBMGA010300 Bombyx mori BGIBMGA010300 I 0.773
BXY_0883500 Bursaphelenchus xylophilus BXY_0883500 I 0.721
Cflo_05860--XP_394134.2_APIME Camponotus floridanus Cflo_05860--XP_394134.2_APIME I 0.665
Cmyd_10006628 Chelonia mydas Cmyd_10006628 I 0.674
DAPPUDRAFT_9350 Daphnia pulex DAPPUDRAFT_9350 I 0.652
DAPPUDRAFT_9412 Daphnia pulex DAPPUDRAFT_9412 N 0.616
ECPE_0001547101 Echinostoma caproni ECPE_0001547101 N 0.601
EFV49290 Trichinella spiralis EFV49290 I 0.637
POU5F1 Callithrix jacchus ENSCJAG00000019789 I 0.607
ENSCSAVG00000007148 Ciona savignyi ENSCSAVG00000007148 I 0.843
POU2F2 Homo sapiens ENSG00000028277 D 0.795
POU6F1 Homo sapiens ENSG00000184271 D 0.624
ENSOANG00000013329 Ornithorhynchus anatinus ENSOANG00000013329 I 0.718
ENSSHAG00000018562 Sarcophilus harrisii ENSSHAG00000018562 I 0.797
acj6 Drosophila melanogaster FBgn0000028 D 0.665
GPUH_0000951201 Gongylonema pulchrum GPUH_0000951201 I 0.677
HelroG138303 Helobdella robusta HelroG138303 I 0.720
L596_g13343 Steinernema carpocapsae L596_g13343 I 0.668
L798_02028 Zootermopsis nevadensis L798_02028 I 0.665
L898_g18190 Steinernema monticolum L898_g18190 I 0.665
MESCA009897 Megaselia scalaris MESCA009897 I 0.769
Ogr05710 Ophisaurus gracilis Ogr05710 I 0.674
PPAI004106 Phlebotomus papatasi PPAI004106 I 0.665
SBAD_0000673901 Soboliphyme baturini SBAD_0000673901 I 0.739
SPER_0000448001 Spirometra erinaceieuropaei SPER_0000448001 I 0.600