CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAVG00000009299
(
Ciona savignyi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCSAVG00000009299
T208479_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000015818
Homeodomain
78
128
PPSNNAVLEKVYSSITRNPKDERLTGLCKQLDWSERQVQRWFRRKREINRP
Links
Other
Homeodomain
family TFs
Other
Ciona savignyi
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29212.m000177
Ricinus communis
29212.m000177
N
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
AMTR_s00029p00050350
Amborella trichopoda
AMTR_s00029p00050350
N
AMTR_s00057p00069720
Amborella trichopoda
AMTR_s00057p00069720
N
AMTR_s00133p00075670
Amborella trichopoda
AMTR_s00133p00075670
N
MYB3
Arabidopsis thaliana
AT1G22640
D
MYB95
Arabidopsis thaliana
AT1G74430
N
ATY13
Arabidopsis thaliana
AT1G74650
D
AtMYB41
Arabidopsis thaliana
AT4G28110
D
AtMYB40
Arabidopsis thaliana
AT5G14340
D
BGIOSGA010548
Oryza indica
BGIOSGA010548
N
Bo4g198650
Brassica oleracea
Bo4g198650
N
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
F775_15745
Aegilops tauschii
F775_15745
N
F775_17614
Aegilops tauschii
F775_17614
N
gene24516-v1.0-hybrid
Fragaria vesca
gene24516-v1.0-hybrid
N
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
GLYMA05G03780
Glycine max
GLYMA05G03780
I
GLYMA09G04370
Glycine max
GLYMA09G04370
I
Gorai.001G239000
Gossypium raimondii
Gorai.001G239000
I
GRMZM2G001223
Zea mays
GRMZM2G001223
I
GRMZM2G051528
Zea mays
GRMZM2G051528
I
MDP0000119369
Malus domestica
MDP0000119369
N
MDP0000911051
Malus domestica
MDP0000911051
N
mg021480m
Mimulus guttatus
mg021480m
N
mgf020736m
Mimulus guttatus
mgf020736m
N
mgf021965m
Mimulus guttatus
mgf021965m
N
mgf025944m
Mimulus guttatus
mgf025944m
N
MLOC_12474
Hordeum vulgare
MLOC_12474
N
MLOC_13019
Hordeum vulgare
MLOC_13019
I
MLOC_59663
Hordeum vulgare
MLOC_59663
I
MLOC_68511
Hordeum vulgare
MLOC_68511
I
MLOC_73037
Hordeum vulgare
MLOC_73037
N
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
OLONG_005719
Oryza longistaminata
OLONG_005719
N
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
ORUFI03G21770
Oryza rufipogon
ORUFI03G21770
N
OS01G0685400
Oryza sativa
OS01G0685400
N
OS04G0517100
Oryza sativa
OS04G0517100
N
OS08G0548000
Oryza sativa
OS08G0548000
N
OS12G0515300
Oryza sativa
OS12G0515300
N
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
Pavir.J06554
Panicum virgatum
Pavir.J06554
N
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
PGSC0003DMG400004610
Solanum tuberosum
PGSC0003DMG400004610
N
PGSC0003DMG400013215
Solanum tuberosum
PGSC0003DMG400013215
I
PK00358.1
Cannabis sativa
PK00358.1
N
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
SapurV1A.1328s0010
Salix purpurea
SapurV1A.1328s0010
N
Traes_1BL_A44464337
Triticum aestivum
Traes_1BL_A44464337
N
Traes_2DL_0E9BE0271
Triticum aestivum
Traes_2DL_0E9BE0271
N
Traes_2DL_86AF9114B
Triticum aestivum
Traes_2DL_86AF9114B
N
Traes_4BL_61E35C455
Triticum aestivum
Traes_4BL_61E35C455
N
Traes_5AS_D238844BB
Triticum aestivum
Traes_5AS_D238844BB
N
TRIUR3_26472
Triticum urartu
TRIUR3_26472
N