CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSEEUG00000012324
(
Erinaceus europaeus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSEEUG00000012324
T209289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MEIS3
M03093_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.764
0.447
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.764
0.447
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.764
0.447
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.764
0.447
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN
NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.706
0.553
ATH1
M10627_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.621
0.395
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST
ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.619
0.421
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.615
0.395
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.615
0.395
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000011223
Homeodomain
56
95
LYGHRFKSYPAEAEKRMLSEKTRLSFLQISNWFINAHRRV
Links
Other
Homeodomain
family TFs
Other
Erinaceus europaeus
TFs
1150 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017853
Oryza indica
BGIOSGA017853
N
0.000
BRADI2G22130
Brachypodium distachyon
BRADI2G22130
N
0.000
F775_06506
Aegilops tauschii
F775_06506
N
0.000
GRMZM2G174610
Zea mays
GRMZM2G174610
N
0.000
GSMUA_AchrUn_randomG18890_001
Musa acuminata
GSMUA_AchrUn_randomG18890_001
N
0.000
LPERR05G16310
Leersia perrieri
LPERR05G16310
N
0.000
OB05G28010
Oryza brachyantha
OB05G28010
N
0.000
OBART05G20480
Oryza barthii
OBART05G20480
N
0.000
OGLUM05G21650
Oryza glumaepatula
OGLUM05G21650
N
0.000
OLONG_007066
Oryza longistaminata
OLONG_007066
N
0.000
OMERI05G18410
Oryza meridionalis
OMERI05G18410
N
0.000
ONIVA02G25740
Oryza nivara
ONIVA02G25740
N
0.000
OPUNC05G18160
Oryza punctata
OPUNC05G18160
N
0.000
ORGLA05G0178700
Oryza glaberrima
ORGLA05G0178700
N
0.000
ORUFI05G21790
Oryza rufipogon
ORUFI05G21790
N
0.000
OS05G0481400
Oryza sativa
OS05G0481400
N
0.000
Pavir.J00951
Panicum virgatum
Pavir.J00951
N
0.000
Pavir.J04157
Panicum virgatum
Pavir.J04157
N
0.000
PDK_20s1595621g002
Phoenix dactylifera
PDK_20s1595621g002
N
0.000
Pm000222
Prunus mume
Pm000222
N
0.000
Sb09g023630
Sorghum bicolor
Sb09g023630
N
0.000
Si022916m.g
Setaria italica
Si022916m.g
N
0.000
Traes_1AL_C340A8E74
Triticum aestivum
Traes_1AL_C340A8E74
N
0.000
Traes_1BL_A8FC9D468
Triticum aestivum
Traes_1BL_A8FC9D468
N
0.000
Traes_1DL_1806CFE5F
Triticum aestivum
Traes_1DL_1806CFE5F
N
0.000
Traes_1DL_1806CFE5F1
Triticum aestivum
Traes_1DL_1806CFE5F1
N
0.000
TRIUR3_13028
Triticum urartu
TRIUR3_13028
N
0.000
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.000