CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ARX *(Loxodonta africana)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSLAFG00000001779	T210958_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ARX M00264_2.00	Homo sapiens	NNWRATNNN	NNNATYWNN	PBM Barrera et al.(2016) ARX_REF	0.752	0.946
Arx M00467_2.00	Mus musculus	NTAATTDN	NHAATTAN	PBM Berger et al.(2008) Arx_1738	0.752	0.946
ARX M03076_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ARX_1	0.752	0.946
Arx M03269_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Arx_1	0.752	0.946
ARX M04895_2.00	Homo sapiens	BTAATTRR	YYAATTAV	SELEX Yin et al.(2017) ARX_eDBD_HT-SELEX	0.752	0.946
Arx M10775_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARX_05	0.752	0.946
ARX M04896_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ARX_eDBD_Methyl-HT-SELEX	0.752	0.946
ARX M00260_2.00	Homo sapiens	NMTAATTANNN	NNNTAATTAKN	PBM Barrera et al.(2016) ARX_L343Q	0.752	0.929
ARX M00261_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) ARX_P353L	0.752	0.929
ARX M00262_2.00	Homo sapiens	ATAATTAT	ATAATTAT	PBM Barrera et al.(2016) ARX_P353R	0.752	0.929
Alx4 M00487_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Alx4_1744	0.738	0.821
Prrx1 M00431_2.00	Mus musculus	TAATTRNN	NNYAATTA	PBM Berger et al.(2008) Prrx1_3442	0.685	0.684
ALX4 M03079_2.00	Homo sapiens	NTAATYNRRTTAN	NTAAYYNRATTAN	SELEX Jolma et al.(2013) ALX4_1	0.738	0.821
Prrx2 M00486_2.00	Mus musculus	WRATNNN	NNNATYW	PBM Berger et al.(2008) Prrx2_3072	0.685	0.684
Alx4 M03278_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx4_1	0.738	0.821
PRRX1 M03120_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX1_1	0.685	0.684
ALX4 M04917_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_HT-SELEX	0.738	0.821
PRRX1 M03121_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX1_2	0.685	0.684
ALX4 M10637_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ALX4_01	0.738	0.821
PRRX1 M03122_2.00	Homo sapiens	TAATTVRRTTA	TAAYYBAATTA	SELEX Jolma et al.(2013) PRRX1_3	0.685	0.684
ALX4 M04918_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_1	0.738	0.821
PRRX2 M03200_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX2_1	0.685	0.684
ALX4 M04919_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_2	0.738	0.821
Prrx2 M03277_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Prrx2_1	0.685	0.684
Pph13 M03845_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Pph13_1	0.737	0.804
PRRX2 M05262_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PRRX2_FL_HT-SELEX	0.685	0.684
Pph13 M06522_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Mathelier et al.(2014) MA0200.1	0.737	0.804
PRRX2 M05258_2.00	Homo sapiens	NTNAYGHN	NDCRTNAN	SELEX Yin et al.(2017) PRRX2_eDBD_HT-SELEX_1	0.685	0.684
Pph13 M06321_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Pph13_Cell_FBgn0023489	0.737	0.804
PRRX2 M05259_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PRRX2_eDBD_HT-SELEX_2	0.685	0.684
Pph13 M06322_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Pph13_SOLEXA_FBgn0023489	0.737	0.804
PRRX2 M09156_2.00	Homo sapiens	HTAATTR	YAATTAD	Misc Kulakovskiy et al.(2013) PRRX2_HUMAN.H11MO.0.C	0.685	0.684
Alx1 M00471_2.00	Mus musculus	NTAATTRN	NYAATTAN	PBM Berger et al.(2008) Cart1_0997	0.736	0.768
Prrx2 M09207_2.00	Mus musculus	HTAATTR	YAATTAD	Misc Kulakovskiy et al.(2013) PRRX2_MOUSE.H11MO.0.C	0.685	0.684
Alx1 M00472_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Cart1_1275	0.736	0.768
Prrx1 M10770_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PMX1_01	0.685	0.684
ALX1 M03226_2.00	Homo sapiens	NTAATTRVRTTAN	NTAAYBYAATTAN	SELEX Jolma et al.(2013) CART1_1	0.736	0.768
PRRX1 M10675_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PMX1_Q6	0.685	0.684
Alx1 M03272_2.00	Mus musculus	NNTAATTRRD	HYYAATTANN	SELEX Jolma et al.(2013) Alx1_1	0.736	0.768
PRRX2 M10735_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRX2_05	0.685	0.684
Alx1 M03273_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx1_2	0.736	0.768
PRRX2 M10776_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRX2_Q2	0.685	0.684
ALX1 M05327_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_HT-SELEX	0.736	0.768
Prrx2 M10767_2.00	Mus musculus	HNVHTAATTRRNHNDW	WHNDNYYAATTADBND	Transfac Matys et al.(2006) V$S8_01	0.685	0.684
ALX1 M09160_2.00	Homo sapiens	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_HUMAN.H11MO.0.B	0.736	0.768
PRRX2 M05260_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) PRRX2_eDBD_Methyl-HT-SELEX_1	0.685	0.684
Alx1 M09201_2.00	Mus musculus	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_MOUSE.H11MO.0.B	0.736	0.768
PRRX2 M05261_2.00	Homo sapiens	NTAATYRN	NYRATTAN	SELEX Yin et al.(2017) PRRX2_eDBD_Methyl-HT-SELEX_2	0.685	0.684
ALX1 M10741_2.00	Homo sapiens	VVHTAATKNNHATTABYN	NRVTAATDNNMATTADBB	Transfac Matys et al.(2006) V$CART1_01	0.736	0.768
PRRX2 M05263_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) PRRX2_FL_Methyl-HT-SELEX_1	0.685	0.684
ALX1 M05328_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_Methyl-HT-SELEX	0.736	0.768
PRRX2 M05264_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) PRRX2_FL_Methyl-HT-SELEX_2	0.685	0.684
Alx3 M00402_2.00	Mus musculus	WAATNDN	NHNATTW	PBM Berger et al.(2008) Alx3_3418	0.734	0.750
Rx M03840_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) Rx_1	0.684	0.719
ALX3 M03172_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_1	0.734	0.750
Rx M03841_2.00	Drosophila melanogaster	NTAATBNSATTAN	NTAATSNVATTAN	SELEX Nitta et al.(2015) Rx_2	0.684	0.719
ALX3 M03173_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_2	0.734	0.750
Rx M06520_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0202.1	0.684	0.719
ALX3 M03174_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ALX3_3	0.734	0.750
Rx M06317_2.00	Drosophila melanogaster	VYTAATTR	YAATTARB	B1H Zhu et al.(2011) Rx_Cell_FBgn0020617	0.684	0.719
ALX3 M05195_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_HT-SELEX	0.734	0.750
Rx M06318_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Rx_SOLEXA_FBgn0020617	0.684	0.719
ALX3 M05198_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_HT-SELEX	0.734	0.750
Rax M00426_2.00	Mus musculus	NNTAATTRN	NYAATTANN	PBM Berger et al.(2008) Rax_3443	0.684	0.702
ALX3 M05196_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_1	0.734	0.750
RAX M03149_2.00	Homo sapiens	NHTAATTRNN	NNYAATTADN	SELEX Jolma et al.(2013) RAX_1	0.684	0.702
ALX3 M05197_2.00	Homo sapiens	NTAAYBHN	NDVRTTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_2	0.734	0.750
RAX M05142_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_HT-SELEX	0.684	0.702
ALX3 M05199_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_1	0.734	0.750
Rax M10773_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RAX_04	0.684	0.702
ALX3 M05200_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_2	0.734	0.750
RAX M05143_2.00	Homo sapiens	NTAAYRNN	NNYRTTAN	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_1	0.684	0.702
hbn M03813_2.00	Drosophila melanogaster	HTAATYTAATTAD	HTAATTARATTAD	SELEX Nitta et al.(2015) hbn_1	0.733	0.786
RAX M05144_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_2	0.684	0.702
hbn M06506_2.00	Drosophila melanogaster	TTAATTR	YAATTAA	B1H Mathelier et al.(2014) MA0226.1	0.733	0.786
hbn M06291_2.00	Drosophila melanogaster	TWAWTTR	YAAWTWA	B1H Zhu et al.(2011) Hbn_Cell_FBgn0008636	0.733	0.786
hbn M06292_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Hbn_SOLEXA_FBgn0008636	0.733	0.786
al M03776_2.00	Drosophila melanogaster	TAAYBNVRTTA	TAAYBNVRTTA	SELEX Nitta et al.(2015) al_1	0.727	0.804
al M06477_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0208.1	0.727	0.804
al M06212_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) Al_Cell_FBgn0000061	0.727	0.804
al M06213_2.00	Drosophila melanogaster	NNYTAATTR	YAATTARNN	B1H Zhu et al.(2011) Al_SOLEXA_FBgn0000061	0.727	0.804
CG11294 M03855_2.00	Drosophila melanogaster	TAATTVVATTA	TAATBBAATTA	SELEX Nitta et al.(2015) CG11294_1	0.726	0.732
CG11294 M03856_2.00	Drosophila melanogaster	TAATTDVATTA	TAATBHAATTA	SELEX Nitta et al.(2015) CG11294_2	0.726	0.732
CG11294 M06531_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0172.1	0.726	0.732
CG11294 M06337_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) CG11294_Cell_FBgn0030058	0.726	0.732
CG11294 M06338_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG11294_SOLEXA_FBgn0030058	0.726	0.732
Uncx M00443_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Uncx4	0.722	0.714
uncx M02111_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5474	0.722	0.714
UNCX M03191_2.00	Homo sapiens	NWAATTVVRTHWN	NWDAYBBAATTWN	SELEX Jolma et al.(2013) UNCX_1	0.722	0.714
UNCX M03192_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) UNCX_2	0.722	0.714
Uncx M03264_2.00	Mus musculus	NTAATTVRATTAN	NTAATYBAATTAN	SELEX Jolma et al.(2013) Uncx_1	0.722	0.714
Uncx M03265_2.00	Mus musculus	NTAATTRR	YYAATTAN	SELEX Jolma et al.(2013) Uncx_2	0.722	0.714
UNCX M05240_2.00	Homo sapiens	NYAATTRV	BYAATTRN	SELEX Yin et al.(2017) UNCX_eDBD_HT-SELEX	0.722	0.714
UNCX M05241_2.00	Homo sapiens	NYRRYKNN	NNMRYYRN	SELEX Yin et al.(2017) UNCX_eDBD_Methyl-HT-SELEX	0.722	0.714
ESX1 M00292_2.00	Homo sapiens	NNTAATNDN	NHNATTANN	PBM Barrera et al.(2016) ESX1_REF	0.679	0.649
ESX1 M03137_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_1	0.679	0.649
ESX1 M03138_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_2	0.679	0.649
ESX1 M05087_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_HT-SELEX	0.679	0.649
ESX1 M05089_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_FL_HT-SELEX	0.679	0.649
ESX1 M00291_2.00	Homo sapiens	NNTRATNRN	NYNATYANN	PBM Barrera et al.(2016) ESX1_K193R	0.679	0.649
ESX1 M05088_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_Methyl-HT-SELEX	0.679	0.649
ESX1 M05090_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_FL_Methyl-HT-SELEX	0.679	0.649
RAX2 M03214_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) RAXL1_1	0.679	0.667
CG9876 M03865_2.00	Drosophila melanogaster	SVTVATBRSN	NSYVATBABS	SELEX Nitta et al.(2015) CG9876_1	0.673	0.649
CG9876 M03866_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) CG9876_2	0.673	0.649
CG9876 M03867_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) CG9876_3	0.673	0.649
CG9876 M03868_2.00	Drosophila melanogaster	TAATTRVNTAATTR	YAATTANBYAATTA	SELEX Nitta et al.(2015) CG9876_4	0.673	0.649
CG9876 M06537_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0184.1	0.673	0.649
CG9876 M06350_2.00	Drosophila melanogaster	DBTAATTR	YAATTAVH	B1H Zhu et al.(2011) CG9876_Cell_FBgn0034821	0.673	0.649
CG9876 M06351_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG9876_SOLEXA_FBgn0034821	0.673	0.649
CG2808 M03875_2.00	Drosophila melanogaster	TAATYNSRTTA	TAAYSNRATTA	SELEX Nitta et al.(2015) CG2808_1	0.715	0.768
DRGX M03199_2.00	Homo sapiens	NTAATTNRATTAN	NTAATYNAATTAN	SELEX Jolma et al.(2013) DRGX_1	0.715	0.750
DRGX M05253_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_HT-SELEX	0.715	0.750
Drgx M10774_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRXL1_01	0.715	0.750
DRGX M05254_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_Methyl-HT-SELEX	0.715	0.750
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.710	0.750
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.710	0.750
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.710	0.750
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.710	0.750
Q0N4F9_NEMVE M02162_2.00	Nematostella vectensis	DTAATTAK	MTAATTAH	PBM Weirauch et al.(2014) pTH6150	0.663	0.561
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.710	0.750
Sebox M02097_2.00	Mus musculus	NHTTAATTAN	NTAATTAADN	PBM Weirauch et al.(2014) pTH6379	0.659	0.579
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.710	0.750
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.710	0.750
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.710	0.750
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.710	0.750
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.710	0.750
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.710	0.750
Mixl1 M10765_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_03	0.656	0.544
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.710	0.750
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.710	0.750
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.710	0.732
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.710	0.732
PHDP M03849_2.00	Drosophila melanogaster	NTAATKNVATTAN	NTAATBNMATTAN	SELEX Nitta et al.(2015) PHDP_1	0.709	0.714
PHDP M06525_2.00	Drosophila melanogaster	HTAATTD	HAATTAD	B1H Mathelier et al.(2014) MA0457.1	0.709	0.714
PHDP M06325_2.00	Drosophila melanogaster	HTAATT	AATTAD	B1H Zhu et al.(2011) PhdP_Cell_FBgn0025334	0.709	0.714
PHDP M06326_2.00	Drosophila melanogaster	YTAATT	AATTAR	B1H Zhu et al.(2011) PhdP_SOLEXA_FBgn0025334	0.709	0.714
CG32532 M03874_2.00	Drosophila melanogaster	NTAAYBNVRTTAN	NTAAYBNVRTTAN	SELEX Nitta et al.(2015) CG32532_1	0.708	0.661
CG32532 M06547_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0179.1	0.708	0.661
CG32532 M06370_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG32532_Cell_FBgn0052532	0.708	0.661
CG32532 M06371_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG32532_SOLEXA_FBgn0052532	0.708	0.661
SHOX M02095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5805	0.708	0.696
Shox2 M00439_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Shox2_2641	0.708	0.696
SHOX M03232_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) SHOX_1	0.708	0.696
SHOX2 M03204_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) SHOX2_1	0.708	0.696
Shox2 M03263_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Shox2_1	0.708	0.696
MIXL1 M03231_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) MIXL1_1	0.652	0.526
CG5369 M03876_2.00	Drosophila melanogaster	TAATTHVATTA	TAATBDAATTA	SELEX Nitta et al.(2015) CG5369_1	0.708	0.696
MIXL1 M05359_2.00	Homo sapiens	TAATBNVATTA	TAATBNVATTA	SELEX Yin et al.(2017) MIXL1_FL_HT-SELEX	0.652	0.526
CG5369 M03877_2.00	Drosophila melanogaster	TAATTRNNTAATBN	NVATTANNYAATTA	SELEX Nitta et al.(2015) CG5369_2	0.708	0.696
MIXL1 M10747_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_02	0.652	0.526
CG5369 M03878_2.00	Drosophila melanogaster	TAATTVRATWA	TWATYBAATTA	SELEX Nitta et al.(2015) CG5369_3	0.708	0.696
MIXL1 M05360_2.00	Homo sapiens	TAATYNRATTA	TAATYNRATTA	SELEX Yin et al.(2017) MIXL1_FL_Methyl-HT-SELEX_1	0.652	0.526
SHOX M05366_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_HT-SELEX	0.708	0.696
MIXL1 M05361_2.00	Homo sapiens	TAATYDCRTTA	TAAYGHRATTA	SELEX Yin et al.(2017) MIXL1_FL_Methyl-HT-SELEX_2	0.652	0.526
Shox2 M10772_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SHOX2_05	0.708	0.696
SHOX M05367_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_1	0.708	0.696
SHOX M05368_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_2	0.708	0.696
VSX2 M00287_2.00	Homo sapiens	NYTAATTARN	NYTAATTARN	PBM Barrera et al.(2016) VSX2_REF	0.706	0.679
VSX2 M03124_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX2_1	0.706	0.679
VSX2 M05036_2.00	Homo sapiens	CTAATTAN	NTAATTAG	SELEX Yin et al.(2017) VSX2_eDBD_HT-SELEX	0.706	0.679
VSX2 M05039_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_HT-SELEX	0.706	0.679
Vsx2 M09180_2.00	Mus musculus	NNRGCTAATTAR	YTAATTAGCYNN	Misc Kulakovskiy et al.(2013) VSX2_MOUSE.H11MO.0.C	0.706	0.679
VSX2 M10676_2.00	Homo sapiens	HNNGCTAATTANBN	NVNTAATTAGCNND	Transfac Matys et al.(2006) V$CHX10_01	0.706	0.679
VSX2 M05037_2.00	Homo sapiens	VYAATTRR	YYAATTRB	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_1	0.706	0.679
VSX2 M05038_2.00	Homo sapiens	NTAAYKHN	NDMRTTAN	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_2	0.706	0.679
VSX2 M05040_2.00	Homo sapiens	NTAAYKVN	NBMRTTAN	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_1	0.706	0.679
VSX2 M05041_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_2	0.706	0.679
VSX2 M00285_2.00	Homo sapiens	NDTWTATTHNNN	NNNDAATAWAHN	PBM Barrera et al.(2016) VSX2_R200P	0.706	0.661
VSX2 M00286_2.00	Homo sapiens	YRWKWNN	NNWMWYR	PBM Barrera et al.(2016) VSX2_R200Q	0.706	0.661
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.702	0.625
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.702	0.625
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.702	0.625
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.702	0.625
Q4RRY4_TETNG M02169_2.00	Tetraodon nigroviridis	NNYAATYAN	NTRATTRNN	PBM Weirauch et al.(2014) pTH6326	0.647	0.544
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.701	0.589
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.701	0.589
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.701	0.589
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.701	0.589
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.701	0.589
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.701	0.589
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.701	0.589
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.701	0.589
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.701	0.589
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.701	0.589
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.701	0.589
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.701	0.589
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.701	0.589
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.701	0.571
ISX M00319_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_REF	0.698	0.625
ISX M03218_2.00	Homo sapiens	NTAATTARATTAN	NTAATYTAATTAN	SELEX Jolma et al.(2013) ISX_1	0.698	0.625
ISX M03219_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Jolma et al.(2013) ISX_2	0.698	0.625
ISX M03220_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) ISX_3	0.698	0.625
ISX M05304_2.00	Homo sapiens	BTAATTRG	CYAATTAV	SELEX Yin et al.(2017) ISX_eDBD_HT-SELEX	0.698	0.625
ISX M05307_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_HT-SELEX	0.698	0.625
ISX M05305_2.00	Homo sapiens	NTAATTAG	CTAATTAN	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_1	0.698	0.625
ISX M05306_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_2	0.698	0.625
ISX M05308_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_1	0.698	0.625
ISX M05309_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_2	0.698	0.625
vsx2 M02079_2.00	Danio rerio	NNYTAATTARN	NYTAATTARNN	PBM Weirauch et al.(2014) pTH6221	0.694	0.661
PROP1 M00316_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) PROP1_R99Q	0.693	0.571
VSX1 M00267_2.00	Homo sapiens	NNHAAYNNN	NNNRTTDNN	PBM Barrera et al.(2016) VSX1_Q175H	0.690	0.607
Isx M00452_2.00	Mus musculus	NNHDATNN	NNATHDNN	PBM Berger et al.(2008) Isx_3445	0.688	0.607
eve M00556_2.00	Drosophila melanogaster	NNTAATTARN	NYTAATTANN	PBM Busser et al.(2012a) Eve	0.637	0.526
unc-4 M03846_2.00	Drosophila melanogaster	TAATTNAATTA	TAATTNAATTA	SELEX Nitta et al.(2015) unc-4_1	0.683	0.714
eve M02115_2.00	Drosophila melanogaster	NTAATNDNN	NNHNATTAN	PBM Weirauch et al.(2014) pTH6436	0.637	0.526
unc-4 M06523_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0250.1	0.683	0.714
eve M03794_2.00	Drosophila melanogaster	VYTAATKASN	NSTMATTARB	SELEX Nitta et al.(2015) eve_1	0.637	0.526
PHOX2B M00279_2.00	Homo sapiens	NVTAATTRMNN	NNKYAATTABN	PBM Barrera et al.(2016) PHOX2B_R100L	0.677	0.732
eve M06486_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0221.1	0.637	0.526
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.677	0.732
eve M06240_2.00	Drosophila melanogaster	DYTAATKA	TMATTARH	B1H Zhu et al.(2011) Eve_Cell_FBgn0000606	0.637	0.526
Otp M00417_2.00	Mus musculus	NNHAATND	HNATTDNN	PBM Berger et al.(2008) Otp_3496	0.676	0.696
eve M06241_2.00	Drosophila melanogaster	HKBTAAYNDTKY	RMAHNRTTAVMD	B1H Zhu et al.(2011) eve_FlyReg_FBgn0000606	0.637	0.526
Vsx2 M02130_2.00	Drosophila melanogaster	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6195	0.672	0.607
eve M06242_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Eve_SOLEXA_FBgn0000606	0.637	0.526
Vsx2 M03880_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Vsx2_1	0.672	0.607
eve M09678_2.00	Drosophila melanogaster	NKHTAATKD	HMATTADMN	Misc Kulakovskiy et al.(2009) eve	0.637	0.526
Vsx2 M03881_2.00	Drosophila melanogaster	HRAYNVNNTRATKD	HMATYANNBNRTYD	SELEX Nitta et al.(2015) Vsx2_2	0.672	0.607
eve M10786_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EVE_Q6	0.637	0.526
Vsx2 M06553_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Mathelier et al.(2014) MA0180.1	0.672	0.607
Vsx2 M06382_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Zhu et al.(2011) CG33980_Cell_FBgn0053980	0.672	0.607
Vsx2 M06383_2.00	Drosophila melanogaster	NNTAATTRRN	NYYAATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_0_FBgn0053980	0.672	0.607
mixl1.S M02233_2.00	Xenopus laevis	NHTAATTAANN	NNTTAATTADN	PBM Weirauch et al.(2014) pTH6163	0.632	0.544
Vsx2 M06384_2.00	Drosophila melanogaster	NNTAATKDN	NHMATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_10_FBgn0053980	0.672	0.607
Vsx2 M06385_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) CG33980_SOLEXA_FBgn0053980	0.672	0.607
HOXA2 M02083_2.00	Homo sapiens	NNNDHHNNN	NNNDDHNNN	PBM Weirauch et al.(2014) pTH5887	0.622	0.526
Hoxa2 M00403_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa2_3079	0.622	0.526
HOXA2 M03097_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXA2_1	0.622	0.526
HOXB2 M03213_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) HOXB2_1	0.622	0.526
Hoxa2 M03251_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxa2_1	0.622	0.526
pb M03872_2.00	Drosophila melanogaster	NTRAYKRY	RYMRTYAN	SELEX Nitta et al.(2015) pb_1	0.622	0.526
HOXA2 M04962_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_HT-SELEX	0.622	0.526
HOXA2 M04965_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_HT-SELEX	0.622	0.526
otp M03834_2.00	Drosophila melanogaster	BTAATTRN	NYAATTAV	SELEX Nitta et al.(2015) otp_1	0.671	0.696
HOXB2 M05292_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB2_eDBD_HT-SELEX	0.622	0.526
otp M03835_2.00	Drosophila melanogaster	YTAATTRV	BYAATTAR	SELEX Nitta et al.(2015) otp_2	0.671	0.696
pb M06545_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0238.1	0.622	0.526
otp M06516_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0236.1	0.671	0.696
pb M06366_2.00	Drosophila melanogaster	BYTAATKA	TMATTARV	B1H Zhu et al.(2011) Pb_Cell_FBgn0051481	0.622	0.526
otp M06309_2.00	Drosophila melanogaster	HYTAATTA	TAATTARD	B1H Zhu et al.(2011) Otp_Cell_FBgn0015524	0.671	0.696
pb M06367_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Pb_SOLEXA_FBgn0051481	0.622	0.526
otp M06310_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Otp_SOLEXA_FBgn0015524	0.671	0.696
Hoxa2 M09566_2.00	Mus musculus	DTGATKGATKDB	VHMATCMATCAH	Misc Heinz et al.(2010) mES-Hoxa2_Donaldson_et_al.	0.622	0.526
OdsH M03851_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) OdsH_1	0.671	0.643
HOXA2 M04963_2.00	Homo sapiens	NTAATTAN	NTAATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_1	0.622	0.526
OdsH M03852_2.00	Drosophila melanogaster	TAATBNVATTA	TAATBNVATTA	SELEX Nitta et al.(2015) OdsH_2	0.671	0.643
HOXA2 M04964_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_2	0.622	0.526
OdsH M06528_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0198.1	0.671	0.643
HOXA2 M04966_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_1	0.622	0.526
OdsH M06330_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Zhu et al.(2011) Odsh_Cell_FBgn0026058	0.671	0.643
HOXA2 M04967_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_2	0.622	0.526
OdsH M06331_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Odsh_SOLEXA_FBgn0026058	0.671	0.643
HOXB2 M05293_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_1	0.622	0.526
VSX1 M00268_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) VSX1_R166Q	0.670	0.607
HOXB2 M05294_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_2	0.622	0.526
ARX M00263_2.00	Homo sapiens	NATYAATTRN	NYAATTRATN	PBM Barrera et al.(2016) ARX_R332H	0.668	0.929
SNAPOd2T00006620001 M02231_2.00	Oikopleura dioica	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5666	0.667	0.643
ISX M00318_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_R83Q	0.666	0.607
NEMVEDRAFT_v1g81309 M02152_2.00	Nematostella vectensis	NTAATDNNN	NNNHATTAN	PBM Weirauch et al.(2014) pTH5477	0.659	0.482
Vsx1 M02129_2.00	Drosophila melanogaster	VTTAATTRR	YYAATTAAB	PBM Weirauch et al.(2014) pTH5821	0.657	0.607
Vsx1 M03879_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) Vsx1_1	0.657	0.607
Vsx1 M06552_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0181.1	0.657	0.607
Vsx1 M06380_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG4136_Cell_FBgn0029775	0.657	0.607
Vsx1 M06381_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG4136_SOLEXA_FBgn0029775	0.657	0.607
Lhx1 M00405_2.00	Mus musculus	TRATDRNNN	NNNYHATYA	PBM Berger et al.(2008) Lhx1_2240	0.607	0.456
Lhx5 M00445_2.00	Mus musculus	TAATKRNNN	NNNYMATTA	PBM Berger et al.(2008) Lhx5_2279	0.607	0.456
LHX1 M05410_2.00	Homo sapiens	NTRATBRN	NYVATYAN	SELEX Yin et al.(2017) LHX1_eDBD_HT-SELEX	0.607	0.456
LHX5 M04936_2.00	Homo sapiens	NTAATTRS	SYAATTAN	SELEX Yin et al.(2017) LHX5_FL_HT-SELEX	0.607	0.456
LHX1 M05411_2.00	Homo sapiens	NHRAYGHN	NDCRTYDN	SELEX Yin et al.(2017) LHX1_eDBD_Methyl-HT-SELEX	0.607	0.456
LHX5 M04937_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) LHX5_FL_Methyl-HT-SELEX_1	0.607	0.456
repo M03826_2.00	Drosophila melanogaster	VTTAATTARB	VYTAATTAAB	SELEX Nitta et al.(2015) repo_1	0.652	0.696
LHX5 M04938_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) LHX5_FL_Methyl-HT-SELEX_2	0.607	0.456
repo M03827_2.00	Drosophila melanogaster	VKYAATTRRN	NYYAATTRMB	SELEX Nitta et al.(2015) repo_2	0.652	0.696
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.606	0.526
repo M03828_2.00	Drosophila melanogaster	VBYAATTRVNNBYAATTRVB	VBYAATTRVNNBYAATTRVB	SELEX Nitta et al.(2015) repo_3	0.652	0.696
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.606	0.526
repo M06511_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0240.1	0.652	0.696
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.606	0.526
repo M06301_2.00	Drosophila melanogaster	DTTAATTA	TAATTAAH	B1H Zhu et al.(2011) Repo_Cell_FBgn0011701	0.652	0.696
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.606	0.526
repo M06302_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Repo_SOLEXA_FBgn0011701	0.652	0.696
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.606	0.526
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.651	0.518
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	0.606	0.509
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.651	0.518
unpg M03836_2.00	Drosophila melanogaster	SSTAATYRVN	NBYRATTASS	SELEX Nitta et al.(2015) unpg_1	0.606	0.509
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.651	0.518
unpg M06517_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0251.1	0.606	0.509
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.651	0.518
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	0.606	0.509
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.651	0.518
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	0.606	0.509
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.651	0.518
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	0.606	0.509
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.651	0.518
unpg M06311_2.00	Drosophila melanogaster	NBTAATTR	YAATTAVN	B1H Zhu et al.(2011) Unpg_Cell_FBgn0015561	0.606	0.509
NEMVEDRAFT_v1g8907 M02154_2.00	Nematostella vectensis	NTAATDRNNN	NNNYHATTAN	PBM Weirauch et al.(2014) pTH6483	0.649	0.500
unpg M06312_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Unpg_SOLEXA_FBgn0015561	0.606	0.509
Gbx2 M00462_2.00	Mus musculus	NNDAHNN	NNDTHNN	PBM Berger et al.(2008) Gbx2_3110	0.606	0.491
NOTO M03241_2.00	Homo sapiens	NNTAATKWRN	NYWMATTANN	SELEX Jolma et al.(2013) NOTO_1	0.643	0.536
Gbx1 M00525_2.00	Mus musculus	NNTAATNR	YNATTANN	PBM Berger et al.(2008) Gbx1_2883	0.606	0.491
NOTO M05390_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) NOTO_eDBD_HT-SELEX	0.643	0.536
GBX1 M03193_2.00	Homo sapiens	NBTAATTRSB	VSYAATTAVN	SELEX Jolma et al.(2013) GBX1_1	0.606	0.491
NOTO M05391_2.00	Homo sapiens	BTMATKRV	BYMATKAV	SELEX Yin et al.(2017) NOTO_eDBD_Methyl-HT-SELEX	0.643	0.536
GBX2 M03201_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_1	0.606	0.491
GBX2 M03202_2.00	Homo sapiens	TAATTRVBCAATWA	TWATTGVBYAATTA	SELEX Jolma et al.(2013) GBX2_2	0.606	0.491
GBX2 M03203_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_3	0.606	0.491
Gbx1 M03286_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx1_1	0.606	0.491
Gbx2 M03268_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx2_1	0.606	0.491
GBX2 M05265_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_HT-SELEX	0.606	0.491
GBX2 M05268_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) GBX2_FL_HT-SELEX	0.606	0.491
GBX2 M05266_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_1	0.606	0.491
ENSCING00000016045 M02078_2.00	Ciona intestinalis	NNYTAATTRGN	NCYAATTARNN	PBM Weirauch et al.(2014) pTH6551	0.641	0.571
GBX2 M05267_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_2	0.606	0.491
GBX2 M05269_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_1	0.606	0.491
GBX2 M05270_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_2	0.606	0.491
EMX1 M02088_2.00	Homo sapiens	NNTAATKANN	NNTMATTANN	PBM Weirauch et al.(2014) pTH5677	0.602	0.526
Emx2 M00495_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Emx2_3420	0.602	0.526
EMX1 M03151_2.00	Homo sapiens	NBTAATTRNN	NNYAATTAVN	SELEX Jolma et al.(2013) EMX1_1	0.602	0.526
EMX1 M03152_2.00	Homo sapiens	YMATTARYTAATKR	YMATTARYTAATKR	SELEX Jolma et al.(2013) EMX1_2	0.602	0.526
EMX2 M03210_2.00	Homo sapiens	NBTAATTANN	NNTAATTAVN	SELEX Jolma et al.(2013) EMX2_1	0.602	0.526
EMX2 M03211_2.00	Homo sapiens	YMATTARBTAATKR	YMATTAVYTAATKR	SELEX Jolma et al.(2013) EMX2_2	0.602	0.526
EMX1 M05145_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_HT-SELEX	0.602	0.526
EMX1 M05147_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) EMX1_FL_HT-SELEX	0.602	0.526
EMX2 M05281_2.00	Homo sapiens	YTAATKAB	VTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_HT-SELEX	0.602	0.526
EMX1 M05146_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_Methyl-HT-SELEX	0.602	0.526
EMX1 M05148_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_FL_Methyl-HT-SELEX	0.602	0.526
EMX2 M05282_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_Methyl-HT-SELEX	0.602	0.526
Noto M02101_2.00	Mus musculus	NNHHATDDNN	NNHHATDDNN	PBM Weirauch et al.(2014) pTH6268	0.637	0.518
Lhx4 M00430_2.00	Mus musculus	NYAATHN	NDATTRN	PBM Berger et al.(2008) Lhx4_1719	0.633	0.446
Lhx3 M00435_2.00	Mus musculus	NNNYAATHW	WDATTRNNN	PBM Berger et al.(2008) Lhx3_3431	0.633	0.446
Lim3 M02116_2.00	Drosophila melanogaster	NNNNNATBRN	NYVATNNNNN	PBM Weirauch et al.(2014) pTH6478	0.633	0.446
Lhx4 M03257_2.00	Mus musculus	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) Lhx4_1	0.633	0.446
Lim3 M03796_2.00	Drosophila melanogaster	BTAATTAV	BTAATTAV	SELEX Nitta et al.(2015) Lim3_1	0.633	0.446
LHX4 M05063_2.00	Homo sapiens	BYAATYRV	BYRATTRV	SELEX Yin et al.(2017) LHX4_eDBD_HT-SELEX	0.633	0.446
LHX4 M05066_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) LHX4_FL_HT-SELEX	0.633	0.446
Lim3 M06492_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0195.1	0.633	0.446
Lim3 M06258_2.00	Drosophila melanogaster	HHTAATKA	TMATTADD	B1H Zhu et al.(2011) Lim3_Cell_FBgn0002023	0.633	0.446
Lim3 M06259_2.00	Drosophila melanogaster	HTRATTR	YAATYAD	B1H Zhu et al.(2011) Lim3_SOLEXA_FBgn0002023	0.633	0.446
Lhx3 M02687_2.00	Mus musculus	VRWTAATTAATTW	WAATTAATTAWYB	SELEX Mathelier et al.(2014) MA0135.1	0.633	0.446
LHX3 M09137_2.00	Homo sapiens	NYTAATTAAWTHH	DDAWTTAATTARN	Misc Kulakovskiy et al.(2013) LHX3_HUMAN.H11MO.0.C	0.633	0.446
Lhx3 M09188_2.00	Mus musculus	NYTRATKRV	BYMATYARN	Misc Kulakovskiy et al.(2013) LHX3_MOUSE.H11MO.0.C	0.633	0.446
Lhx3 M09570_2.00	Mus musculus	NNBTAATTAV	BTAATTAVNN	Misc Heinz et al.(2010) Neuron-Lhx3_GSE31456	0.633	0.446
LHX3 M10657_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX3A_01	0.633	0.446
LHX3 M10658_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX3b_01	0.633	0.446
LHX3 M10659_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX3_Q3	0.633	0.446
LHX4 M05064_2.00	Homo sapiens	BYAATTRV	BYAATTRV	SELEX Yin et al.(2017) LHX4_eDBD_Methyl-HT-SELEX_1	0.633	0.446
LHX4 M05065_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) LHX4_eDBD_Methyl-HT-SELEX_2	0.633	0.446
LHX4 M05067_2.00	Homo sapiens	NYAATTRN	NYAATTRN	SELEX Yin et al.(2017) LHX4_FL_Methyl-HT-SELEX_1	0.633	0.446
LHX4 M05068_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) LHX4_FL_Methyl-HT-SELEX_2	0.633	0.446
E5 M03814_2.00	Drosophila melanogaster	STAATKNN	NNMATTAS	SELEX Nitta et al.(2015) E5_1	0.632	0.500
E5 M06507_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0189.1	0.632	0.500
E5 M06293_2.00	Drosophila melanogaster	NBTAATKA	TMATTAVN	B1H Zhu et al.(2011) E5_Cell_FBgn0008646	0.632	0.500
E5 M06294_2.00	Drosophila melanogaster	NTAATDR	YHATTAN	B1H Zhu et al.(2011) E5_SOLEXA_FBgn0008646	0.632	0.500
CG11085 M03857_2.00	Drosophila melanogaster	BTAAWYGN	NCRWTTAV	SELEX Nitta et al.(2015) CG11085_1	0.631	0.464
CG11085 M03858_2.00	Drosophila melanogaster	NTAAWCGN	NCGWTTAN	SELEX Nitta et al.(2015) CG11085_2	0.631	0.464
CG11085 M06532_2.00	Drosophila melanogaster	TTAATDG	CHATTAA	B1H Mathelier et al.(2014) MA0171.1	0.631	0.464
CG11085 M06339_2.00	Drosophila melanogaster	NTTAATDGV	BCHATTAAN	B1H Zhu et al.(2011) CG11085_Cell_FBgn0030408	0.631	0.464
CG11085 M06340_2.00	Drosophila melanogaster	NHTAAWBRNN	NNYVWTTADN	B1H Zhu et al.(2011) CG11085_SOLEXA_FBgn0030408	0.631	0.464
HESX1 M00309_2.00	Homo sapiens	HTAATTRGN	NCYAATTAD	PBM Barrera et al.(2016) HESX1_REF	0.631	0.518
P79681_ACIBE M02200_2.00	Acipenser baerii	DTAATTRB	VYAATTAH	PBM Weirauch et al.(2014) pTH6156	0.631	0.518
HESX1 M00307_2.00	Homo sapiens	TAATTRNN	NNYAATTA	PBM Barrera et al.(2016) HESX1_N125S	0.631	0.518
HESX1 M00308_2.00	Homo sapiens	NATAHATRN	NYATDTATN	PBM Barrera et al.(2016) HESX1_R160C	0.631	0.500
Lim1 M03853_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Lim1_1	0.631	0.446
Lim1 M06529_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0194.1	0.631	0.446
Lim1 M06332_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Zhu et al.(2011) Lim1_Cell_FBgn0026411	0.631	0.446
Lim1 M06333_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Lim1_SOLEXA_FBgn0026411	0.631	0.446
NEMVEDRAFT_v1g205636 M02150_2.00	Nematostella vectensis	NTAATTAN	NTAATTAN	PBM Weirauch et al.(2014) pTH5491	0.630	0.500
CG18599 M06539_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0177.1	0.629	0.518
CG18599 M06354_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) CG18599_Cell_FBgn0038592	0.629	0.518
CG18599 M06355_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) CG18599_SOLEXA_FBgn0038592	0.629	0.518
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.628	0.500
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.628	0.500
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.628	0.500
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.628	0.500
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.628	0.500
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.628	0.500
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.628	0.500
ems M02114_2.00	Drosophila melanogaster	NTAATKRNB	VNYMATTAN	PBM Weirauch et al.(2014) pTH5673	0.627	0.464
ems M03789_2.00	Drosophila melanogaster	BTAATTAN	NTAATTAV	SELEX Nitta et al.(2015) ems_1	0.627	0.464
ems M03790_2.00	Drosophila melanogaster	BTAATTAVBVBTAATKRN	NYMATTAVBVBTAATTAV	SELEX Nitta et al.(2015) ems_2	0.627	0.464
ems M03791_2.00	Drosophila melanogaster	BTAATKRN	NYMATTAV	SELEX Nitta et al.(2015) ems_3	0.627	0.464
ems M03792_2.00	Drosophila melanogaster	STAATKRSSSSTAATKRV	BYMATTASSSSYMATTAS	SELEX Nitta et al.(2015) ems_4	0.627	0.464
ems M06484_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Mathelier et al.(2014) MA0219.1	0.627	0.464
ems M06233_2.00	Drosophila melanogaster	WHTAATKR	YMATTADW	B1H Zhu et al.(2011) Ems_Cell_FBgn0000576	0.627	0.464
ems M06234_2.00	Drosophila melanogaster	TSTMATHM	KDATKASA	B1H Zhu et al.(2011) ems_FlyReg_FBgn0000576	0.627	0.464
ems M06235_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Ems_SOLEXA_FBgn0000576	0.627	0.464
ems M09676_2.00	Drosophila melanogaster	WTWATGA	TCATWAW	Misc Kulakovskiy et al.(2009) ems	0.627	0.464
vab-7 M02186_2.00	Caenorhabditis elegans	KTAATTAK	MTAATTAM	PBM Weirauch et al.(2014) pTH6104	0.627	0.518
Meox1 M00384_2.00	Mus musculus	NTRATKRNN	NNYMATYAN	PBM Berger et al.(2008) Meox1_2310	0.624	0.500
MEOX1 M03077_2.00	Homo sapiens	NNTAATTASN	NSTAATTANN	SELEX Jolma et al.(2013) MEOX1_1	0.624	0.500
MEOX1 M04901_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_1	0.624	0.500
MEOX1 M04902_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_2	0.624	0.500
MEOX1 M04903_2.00	Homo sapiens	NTAAYGWB	VWCRTTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_1	0.624	0.500
MEOX1 M04904_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_2	0.624	0.500
Evx2 M00393_2.00	Mus musculus	NNTAAYNN	NNRTTANN	PBM Berger et al.(2008) Evx2_2645	0.622	0.482
Evx1 M00395_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Evx1_3952	0.622	0.482
EVX1 M03102_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX1_1	0.622	0.482
EVX2 M03215_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX2_1	0.622	0.482
EVX1 M04985_2.00	Homo sapiens	VTAATKAB	VTMATTAB	SELEX Yin et al.(2017) EVX1_eDBD_HT-SELEX	0.622	0.482
EVX2 M05295_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_HT-SELEX	0.622	0.482
EVX2 M09158_2.00	Homo sapiens	NBTTTATKRCHNN	NNDGYMATAAAVN	Misc Kulakovskiy et al.(2013) EVX2_HUMAN.H11MO.0.A	0.622	0.482
Evx1 M09174_2.00	Mus musculus	WGATTTATDRBHN	NDVYHATAAATCW	Misc Kulakovskiy et al.(2013) EVX1_MOUSE.H11MO.0.C	0.622	0.482
Evx2 M09173_2.00	Mus musculus	BTTTATKRCHBN	NVDGYMATAAAV	Misc Kulakovskiy et al.(2013) EVX2_MOUSE.H11MO.0.A	0.622	0.482
EVX2 M10736_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EVX2_04	0.622	0.482
EVX1 M04986_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_1	0.622	0.482
EVX1 M04987_2.00	Homo sapiens	HTWAYGAB	VTCRTWAD	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_2	0.622	0.482
EVX2 M05296_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_1	0.622	0.482
EVX2 M05297_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_2	0.622	0.482
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.622	0.482
btn M03832_2.00	Drosophila melanogaster	NNTAATKANB	VNTMATTANN	SELEX Nitta et al.(2015) btn_1	0.622	0.464
btn M03833_2.00	Drosophila melanogaster	VNTAATKABN	NVTMATTANB	SELEX Nitta et al.(2015) btn_2	0.622	0.464
btn M06515_2.00	Drosophila melanogaster	DTAATKA	TMATTAH	B1H Mathelier et al.(2014) MA0215.1	0.622	0.464
btn M06307_2.00	Drosophila melanogaster	NDTAATKA	TMATTAHN	B1H Zhu et al.(2011) Btn_Cell_FBgn0014949	0.622	0.464
btn M06308_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) Btn_SOLEXA_FBgn0014949	0.622	0.464
ind M06527_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0228.1	0.621	0.518
ind M06329_2.00	Drosophila melanogaster	YVYTAATKA	TMATTARBR	B1H Zhu et al.(2011) Ind_Cell_FBgn0025776	0.621	0.518
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.621	0.500
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.621	0.500
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.621	0.500
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.621	0.500
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.621	0.500
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.619	0.500
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.619	0.500
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.619	0.500
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.619	0.500
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.619	0.500
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.619	0.500
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.619	0.500
Q9BJW6_9CNID M02215_2.00	Sarsia sp. Long Island Sound	NBTAATTAVN	NBTAATTAVN	PBM Weirauch et al.(2014) pTH6287	0.615	0.482
C4B866_NEMVE M02052_2.00	Nematostella vectensis	NNTTAATTARNN	NNYTAATTAANN	PBM Weirauch et al.(2014) pTH6176	0.615	0.375
LHX2 M02085_2.00	Homo sapiens	NNNYAAHDDN	NHHDTTRNNN	PBM Weirauch et al.(2014) pTH5812	0.615	0.393
Lhx2 M00380_2.00	Mus musculus	NTAATKRN	NYMATTAN	PBM Berger et al.(2008) Lhx2_0953	0.615	0.393
Lhx9 M00406_2.00	Mus musculus	NTAATDRN	NYHATTAN	PBM Berger et al.(2008) Lhx9_3492	0.615	0.393
LHX2 M03106_2.00	Homo sapiens	NNTAATTAGN	NCTAATTANN	SELEX Jolma et al.(2013) LHX2_1	0.615	0.393
LHX2 M03107_2.00	Homo sapiens	YAATTANVCTAATTR	YAATTAGBNTAATTR	SELEX Jolma et al.(2013) LHX2_2	0.615	0.393
LHX9 M03163_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) LHX9_1	0.615	0.393
LHX9 M03164_2.00	Homo sapiens	TAATTRGYMATTA	TAATKRCYAATTA	SELEX Jolma et al.(2013) LHX9_2	0.615	0.393
LHX9 M05170_2.00	Homo sapiens	YTAATTRG	CYAATTAR	SELEX Yin et al.(2017) LHX9_eDBD_HT-SELEX	0.615	0.393
LHX9 M05173_2.00	Homo sapiens	NTAATTRG	CYAATTAN	SELEX Yin et al.(2017) LHX9_FL_HT-SELEX	0.615	0.393
LHX2 M09136_2.00	Homo sapiens	NBYTAATTRVNB	VNBYAATTARVN	Misc Kulakovskiy et al.(2013) LHX2_HUMAN.H11MO.0.A	0.615	0.393
Lhx2 M09169_2.00	Mus musculus	NNTAATKRGN	NCYMATTANN	Misc Kulakovskiy et al.(2013) LHX2_MOUSE.H11MO.0.A	0.615	0.393
Lhx2 M09562_2.00	Mus musculus	NYTAATTA	TAATTARN	Misc Heinz et al.(2010) HFSC-Lhx2_GSE48068	0.615	0.393
LHX2 M10655_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX2_Q4	0.615	0.393
LHX2 M10656_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX2_Q6	0.615	0.393
LHX9 M05171_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) LHX9_eDBD_Methyl-HT-SELEX_1	0.615	0.393
LHX9 M05172_2.00	Homo sapiens	HTAACGAB	VTCGTTAD	SELEX Yin et al.(2017) LHX9_eDBD_Methyl-HT-SELEX_2	0.615	0.393
LHX9 M05174_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) LHX9_FL_Methyl-HT-SELEX_1	0.615	0.393
LHX9 M05175_2.00	Homo sapiens	HTAACGAB	VTCGTTAD	SELEX Yin et al.(2017) LHX9_FL_Methyl-HT-SELEX_2	0.615	0.393
ARX M00265_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ARX_T333N	0.614	0.929
ap M06478_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0209.1	0.613	0.357
ap M06214_2.00	Drosophila melanogaster	VYTAATKA	TMATTARB	B1H Zhu et al.(2011) Ap_Cell_FBgn0000099	0.613	0.357
ap M06215_2.00	Drosophila melanogaster	BAATHA	TDATTV	B1H Zhu et al.(2011) ap_FlyReg_FBgn0000099	0.613	0.357
ap M06216_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Ap_SOLEXA_FBgn0000099	0.613	0.357
ap M10781_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$AP_Q6	0.613	0.357
Barx2 M00457_2.00	Mus musculus	NTAABNDNN	NNHNVTTAN	PBM Berger et al.(2008) Barx2_3447	0.611	0.482
BARX2 M04915_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_HT-SELEX	0.611	0.482
BARX2 M04916_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_Methyl-HT-SELEX	0.611	0.482
HESX1 M00306_2.00	Homo sapiens	WRATDRNN	NNYHATYW	PBM Barrera et al.(2016) HESX1_E149K	0.611	0.500
Barx1 M00413_2.00	Mus musculus	NNTAAYBDNN	NNHVRTTANN	PBM Berger et al.(2008) Barx1_2877	0.610	0.446
barx1 M02107_2.00	Tetraodon nigroviridis	NTAAYNNNN	NNNNRTTAN	PBM Weirauch et al.(2014) pTH6449	0.610	0.446
BARX1 M03144_2.00	Homo sapiens	TAATBGNWWWTTAATBR	YVATTAAWWWNCVATTA	SELEX Jolma et al.(2013) BARX1_1	0.610	0.446
BARX1 M03145_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BARX1_2	0.610	0.446
Barx1 M09181_2.00	Mus musculus	NNWAAKKGYTWH	DWARCMMTTWNN	Misc Kulakovskiy et al.(2013) BARX1_MOUSE.H11MO.0.C	0.610	0.446
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.610	0.464
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.610	0.464
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.610	0.464
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.610	0.464
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.610	0.464
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.610	0.464
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.610	0.464
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.610	0.464
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.610	0.464
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.610	0.464
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.610	0.464
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.610	0.464
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.610	0.464
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.610	0.464
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.610	0.464
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.610	0.464
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.610	0.464
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.610	0.464
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.610	0.464
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.610	0.464
ro M06495_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0241.1	0.609	0.464
ro M06264_2.00	Drosophila melanogaster	NYTAATTA	TAATTARN	B1H Zhu et al.(2011) Ro_Cell_FBgn0003267	0.609	0.464
ro M06265_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Ro_SOLEXA_FBgn0003267	0.609	0.464
Gsx2 M00469_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Gsh2_3990	0.609	0.500
GSX1 M03205_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX1_1	0.609	0.500
GSX2 M03227_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX2_1	0.609	0.500
GSX1 M05271_2.00	Homo sapiens	NYMATNRN	NYNATKRN	SELEX Yin et al.(2017) GSX1_eDBD_HT-SELEX	0.609	0.500
GSX2 M05329_2.00	Homo sapiens	HTAATKRS	SYMATTAD	SELEX Yin et al.(2017) GSX2_eDBD_HT-SELEX	0.609	0.500
GSX1 M05272_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GSX1_eDBD_Methyl-HT-SELEX	0.609	0.500
GSX2 M05330_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GSX2_eDBD_Methyl-HT-SELEX	0.609	0.500
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.609	0.464
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.609	0.464
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.609	0.464
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.609	0.464
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.609	0.464
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.609	0.464
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.609	0.464
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.609	0.464
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.609	0.446
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.609	0.446
Bsx M00516_2.00	Mus musculus	NTAAYBDNN	NNHVRTTAN	PBM Berger et al.(2008) Bsx_3483	0.609	0.446
bsh M02113_2.00	Drosophila melanogaster	NNTAAYBDNN	NNHVRTTANN	PBM Weirauch et al.(2014) pTH6569	0.609	0.446
BSX M03235_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BSX_1	0.609	0.446
bsh M03786_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) bsh_1	0.609	0.446
bsh M03787_2.00	Drosophila melanogaster	TAATTRVWTAATKR	YMATTAWBYAATTA	SELEX Nitta et al.(2015) bsh_2	0.609	0.446
bsh M03788_2.00	Drosophila melanogaster	NTAATBRN	NYVATTAN	SELEX Nitta et al.(2015) bsh_3	0.609	0.446
BSX M05377_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_1	0.609	0.446
BSX M05378_2.00	Homo sapiens	BTAATBRV	BYVATTAV	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_2	0.609	0.446
bsh M06483_2.00	Drosophila melanogaster	YTAATBR	YVATTAR	B1H Mathelier et al.(2014) MA0214.1	0.609	0.446
bsh M06231_2.00	Drosophila melanogaster	HYTAATBRV	BYVATTARD	B1H Zhu et al.(2011) Bsh_Cell_FBgn0000529	0.609	0.446
bsh M06232_2.00	Drosophila melanogaster	NTAATKR	YMATTAN	B1H Zhu et al.(2011) Bsh_SOLEXA_FBgn0000529	0.609	0.446
BSX M05379_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_1	0.609	0.446
BSX M05380_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_2	0.609	0.446
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.608	0.482
zfhx4 M02108_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5654	0.608	0.357
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.603	0.464
MSX2 M00290_2.00	Homo sapiens	WDATNDNN	NNHNATHW	PBM Barrera et al.(2016) MSX2_REF	0.602	0.464
Msx2 M00414_2.00	Mus musculus	HRATKRNN	NNYMATYD	PBM Berger et al.(2008) Msx2_3449	0.602	0.464
Msx3 M00429_2.00	Mus musculus	TAATKDNN	NNHMATTA	PBM Berger et al.(2008) Msx3_3206	0.602	0.464
Msx1 M00501_2.00	Mus musculus	NHDATND	HNATHDN	PBM Berger et al.(2008) Msx1_3031	0.602	0.464
MSX1 M03184_2.00	Homo sapiens	TAATTRBHHNHTAATTRN	NYAATTADNDDVYAATTA	SELEX Jolma et al.(2013) MSX1_1	0.602	0.464
MSX1 M03185_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_2	0.602	0.464
MSX1 M03186_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_3	0.602	0.464
MSX2 M03127_2.00	Homo sapiens	TAATTRBHWKWTAATTGV	BCAATTAWMWDVYAATTA	SELEX Jolma et al.(2013) MSX2_1	0.602	0.464
MSX2 M03128_2.00	Homo sapiens	NTAATTGB	VCAATTAN	SELEX Jolma et al.(2013) MSX2_2	0.602	0.464
Msx3 M03255_2.00	Mus musculus	TAATTGSHHNNTAATTRN	NYAATTANNDDSCAATTA	SELEX Jolma et al.(2013) Msx3_1	0.602	0.464
Msx3 M03256_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Msx3_2	0.602	0.464
MSX1 M05221_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_HT-SELEX	0.602	0.464
MSX1 M05224_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_HT-SELEX	0.602	0.464
MSX2 M05060_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_HT-SELEX	0.602	0.464
MSX1 M10715_2.00	Homo sapiens	HNBTWWNTG	CANWWAVND	Transfac Matys et al.(2006) V$MSX1_01	0.602	0.464
MSX1 M10716_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5_01	0.602	0.464
MSX1 M10717_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5	0.602	0.464
MSX2 M10677_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q3	0.602	0.464
MSX2 M10678_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q6	0.602	0.464
MSX2 M00288_2.00	Homo sapiens	NTAATNDN	NHNATTAN	PBM Barrera et al.(2016) MSX2_P148H	0.602	0.464
MSX1 M05222_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_1	0.602	0.464
MSX1 M05223_2.00	Homo sapiens	NTWAYGMB	VKCRTWAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_2	0.602	0.464
MSX1 M05225_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_1	0.602	0.464
MSX1 M05226_2.00	Homo sapiens	NTWAYGWB	VWCRTWAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_2	0.602	0.464
MSX2 M05061_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_1	0.602	0.464
MSX2 M05062_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_2	0.602	0.464
Dr M00555_2.00	Drosophila melanogaster	TAATTRNN	NNYAATTA	PBM Busser et al.(2012a) Msh	0.602	0.446
Dr M06482_2.00	Drosophila melanogaster	TAATTGS	SCAATTA	B1H Mathelier et al.(2014) MA0188.1	0.602	0.446
Dr M06229_2.00	Drosophila melanogaster	TAATTGSHB	VDSCAATTA	B1H Zhu et al.(2011) Dr_Cell_FBgn0000492	0.602	0.446
Dr M06230_2.00	Drosophila melanogaster	TAATTR	YAATTA	B1H Zhu et al.(2011) Dr_SOLEXA_FBgn0000492	0.602	0.446
ventx3.2 M02232_2.00	Xenopus tropicalis	ATTAATTA	TAATTAAT	PBM Weirauch et al.(2014) pTH6291	0.602	0.429
en M03793_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) en_1	0.602	0.411
en M06485_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0220.1	0.602	0.411
en M06236_2.00	Drosophila melanogaster	NYTAATTR	YAATTARN	B1H Zhu et al.(2011) En_Cell_FBgn0000577	0.602	0.411
en M06237_2.00	Drosophila melanogaster	DBTAATKR	YMATTAVH	B1H Zhu et al.(2011) en_FlyReg_FBgn0000577	0.602	0.411
en M06238_2.00	Drosophila melanogaster	NNNTAATTRN	NYAATTANNN	B1H Zhu et al.(2011) en_SOLEXA_2_FBgn0000577	0.602	0.411
en M06239_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Zhu et al.(2011) En_SOLEXA_FBgn0000577	0.602	0.411
en M09677_2.00	Drosophila melanogaster	HTAATTRN	NYAATTAD	Misc Kulakovskiy et al.(2009) en	0.602	0.411
en M10785_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EN_Q6	0.602	0.411
ceh-62 M02187_2.00	Caenorhabditis elegans	NNYAATTRNN	NNYAATTRNN	PBM Weirauch et al.(2014) pTH5492	0.601	0.429
ventx1.2.S M10805_2.00	Xenopus laevis	RSRMAAATWBBVS	SBBBWATTTKYSY	Transfac Matys et al.(2006) V$XVENT1_01	0.601	0.482
En2 M00484_2.00	Mus musculus	NNYHATHN	NDATDRNN	PBM Berger et al.(2008) En2_0952	0.600	0.411
En1 M00519_2.00	Mus musculus	HNWTNNN	NNNAWND	PBM Berger et al.(2008) En1_3123	0.600	0.411
EN1 M03180_2.00	Homo sapiens	NNTAATTRVB	VBYAATTANN	SELEX Jolma et al.(2013) EN1_1	0.600	0.411
EN1 M03181_2.00	Homo sapiens	TAATTRSNYAATTA	TAATTRNSYAATTA	SELEX Jolma et al.(2013) EN1_2	0.600	0.411
EN1 M03182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) EN1_3	0.600	0.411
EN1 M03183_2.00	Homo sapiens	TDAKKRSNYMATTA	TAATKRNSYMMTHA	SELEX Jolma et al.(2013) EN1_4	0.600	0.411
EN2 M03189_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) EN2_1	0.600	0.411
EN2 M03190_2.00	Homo sapiens	VBTAATTRNN	NNYAATTAVB	SELEX Jolma et al.(2013) EN2_2	0.600	0.411
En2 M03276_2.00	Mus musculus	VBTAATTASN	NSTAATTAVB	SELEX Jolma et al.(2013) En2_1	0.600	0.411
EN1 M05218_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_HT-SELEX	0.600	0.411
EN2 M05237_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_HT-SELEX	0.600	0.411
EN1 M05871_2.00	Homo sapiens	VNYAATTA	TAATTRNB	SMiLE-seq Isakova et al.(2017) EN1	0.600	0.411
EN1 M10714_2.00	Homo sapiens	RTDDTBB	VVAHHAY	Transfac Matys et al.(2006) V$EN1_01	0.600	0.411
EN1 M05219_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_1	0.600	0.411
EN1 M05220_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_2	0.600	0.411
EN2 M05238_2.00	Homo sapiens	VHTDAYGHB	VDCRTHADB	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_1	0.600	0.411
EN2 M05239_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_2	0.600	0.411
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSLAFP00000001485	Homeodomain	45	100	RRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRPKSS
ENSLAFP00000021293	Homeodomain	320	376	RRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRKWRKR
ENSLAFP00000025733	Homeodomain	312	368	RRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRKWRKR

Links
Other Homeodomain family TFs
Other *Loxodonta africana* TFs

6283 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
PV05_11745	Exophiala xenobiotica	PV05_11745	N	0.000
PV07_10669	Cladophialophora immunda	PV07_10669	N	0.000
PV10_08874	Exophiala mesophila	PV10_08874	N	0.000
Z518_04244	Rhinocladiella mackenziei	Z518_04244	N	0.000

ARX (Loxodonta africana) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

6283 Related TFs

ARX **(Loxodonta africana)
Homeodomain**