29983.m003297 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 29983.m003297 T226995_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.708 0.600
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29983.m003297 Homeodomain 206 264

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10028391m.g Capsella rubella Carubv10028391m.g I 0.652
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.798
Ca_02034 Cicer arietinum Ca_02034 I 0.664
Ca_12172 Cicer arietinum Ca_12172 I 0.716
Ciclev10027184m.g Citrus clementina Ciclev10027184m.g I 0.702
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.733
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.655
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.724
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.724
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.730
LPERR02G24020 Leersia perrieri LPERR02G24020 I 0.708
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.686
MDP0000804580 Malus domestica MDP0000804580 I 0.675
mgf024641m Mimulus guttatus mgf024641m I 0.734
mgf026503m Mimulus guttatus mgf026503m I 0.689
MLOC_18998 Hordeum vulgare MLOC_18998 I 0.713
OGLUM02G30190 Oryza glumaepatula OGLUM02G30190 I 0.708
OMERI02G28440 Oryza meridionalis OMERI02G28440 I 0.708
OPUNC02G27120 Oryza punctata OPUNC02G27120 I 0.708
ZHD7 Oryza sativa OS02G0706600 D 0.708
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.730
Pavir.Ab02855 Panicum virgatum Pavir.Ab02855 I 0.708
Pavir.J22932 Panicum virgatum Pavir.J22932 N 0.617
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.783
PRUPE_ppa020272mg Prunus persica PRUPE_ppa020272mg I 0.673
Q0DYA2_ORYSJ Oryza sativa Q0DYA2_ORYSJ I 0.708
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.783
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.730
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.738
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.738
Si020227m.g Setaria italica Si020227m.g I 0.730
TCM_001660 Theobroma cacao TCM_001660 I 0.686
Traes_4AL_5659286D11 Triticum aestivum Traes_4AL_5659286D11 N 0.617