estExt_fgeneshDP_pg.C_350041 (Dictyostelium purpureum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgeneshDP_pg.C_350041 T227408_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAD26261
M02055_2.00 		Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN		 PBM
Weirauch et al.(2014)
pTH6363 		0.705 0.526
NEMVEDRAFT_v1g105595
M02143_2.00 		Nematostella vectensis
NTWATWRN
NYWATWAN		 PBM
Weirauch et al.(2014)
pTH5503 		0.657 0.439
hbx10
M02074_2.00 		Dictyostelium discoideum
NYAATWWN
NWWATTRN		 PBM
Weirauch et al.(2014)
pTH5547 		0.618 0.544
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgeneshDP_pg.C_350041 Homeodomain 129 185

Links

Other Homeodomain family TFs
Other Dictyostelium purpureum TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014441 Ricinus communis 30147.m014441 N 0.000
cassava37235.valid.m1 Manihot esculenta cassava37235.valid.m1 N 0.000
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I 0.000
Cla001517 Citrullus lanatus Cla001517 I 0.000
evm.TU.supercontig_4.138 Carica papaya evm.TU.supercontig_4.138 N 0.000
gene06460-v1.0-hybrid Fragaria vesca gene06460-v1.0-hybrid N 0.000
GLYMA08G47520 Glycine max GLYMA08G47520 I 0.000
GLYMA18G53954 Glycine max GLYMA18G53954 I 0.000
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I 0.000
Lus10001809.g Linum usitatissimum Lus10001809.g I 0.000
Lus10002581.g Linum usitatissimum Lus10002581.g I 0.000
MDP0000130686 Malus domestica MDP0000130686 N 0.000
MTR_3g098810 Medicago truncatula MTR_3g098810 N 0.000
MTR_7g005280 Medicago truncatula MTR_7g005280 I 0.000
PK12461.1 Cannabis sativa PK12461.1 I 0.000
Pm024558 Prunus mume Pm024558 N 0.000
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I 0.000
POPTR_0012s10530 Populus trichocarpa POPTR_0012s10530 N 0.000
POPTR_0015s11420 Populus trichocarpa POPTR_0015s11420 N 0.000
PRUPE_ppa027024mg Prunus persica PRUPE_ppa027024mg N 0.000
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I 0.000
SapurV1A.0614s0190 Salix purpurea SapurV1A.0614s0190 N 0.000
SapurV1A.1562s0040 Salix purpurea SapurV1A.1562s0040 N 0.000
SapurV1A.1580s0010 Salix purpurea SapurV1A.1580s0010 N 0.000
TCM_008477 Theobroma cacao TCM_008477 I 0.000
TCM_014713 Theobroma cacao TCM_014713 I 0.000
VIT_17s0000g00770 Vitis vinifera VIT_17s0000g00770 N 0.000