scaffold251-EXSNAP2012.22 (Pristionchus exspectatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 scaffold251-EXSNAP2012.22 T235957_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.625 0.250
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.625 0.250
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.625 0.250
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.625 0.250
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold251-EXSNAP2012.22 Homeodomain 67 100
scaffold251-EXSNAP2012.22 Homeodomain 155 176

Links

Other Homeodomain family TFs
Other Pristionchus exspectatus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011917 Calypte anna Aan_R011917 I 0.611
ACUA026833 Anopheles culicifacies ACUA026833 I 0.646
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.615
AMAM000848 Anopheles maculatus AMAM000848 I 0.646
ANCCAN_03327 Ancylostoma caninum ANCCAN_03327 N 0.744
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.638
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.650
CGI_10009720 Crassostrea gigas CGI_10009720 I 0.625
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.624
CLEC007171 Cimex lectularius CLEC007171 I 0.615
D917_01051 Trichinella nativa D917_01051 I 0.599
DICVIV_04104 Dictyocaulus viviparus DICVIV_04104 N 0.776
DILT_0000101001 Diphyllobothrium latum DILT_0000101001 N 0.625
EFV57629 Trichinella spiralis EFV57629 I 0.599
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.620
DLX4 Bos taurus ENSBTAG00000007353 I 0.608
DLX3 Bos taurus ENSBTAG00000017409 I 0.608
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.608
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.614
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.641
HESX1 Homo sapiens ENSG00000163666 D 0.625
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.666
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.599
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.607
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.608
DBX1 Procavia capensis ENSPCAG00000004905 N 0.601
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.619
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.624
ENSTSYG00000000516 Tarsius syrichta ENSTSYG00000000516 I 0.627
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.651
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.644
GF13343 Drosophila ananassae FBgn0090375 I 0.599
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.655
HNAJ_0000529701 Hymenolepis nana HNAJ_0000529701 N 0.639
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.625
L596_g8967 Steinernema carpocapsae L596_g8967 I 0.615
L798_06393 Zootermopsis nevadensis L798_06393 I 0.603
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.611
MCINX008871 Melitaea cinxia MCINX008871 I 0.610
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.612
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.608
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.605
SBAD_0000602401 Soboliphyme baturini SBAD_0000602401 I 0.616
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.678
T265_00628 Opisthorchis viverrini T265_00628 I 0.661
T265_02852 Opisthorchis viverrini T265_02852 I 0.658
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.618
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.643
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.653
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.616