IRF5 (Oryctolagus cuniculus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSOCUG00000010101 T244256_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF5
M02256_2.00		 Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.962 0.962
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.962 0.962
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.962 0.962
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.962 0.962
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.962 0.962
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.962 0.962
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.962 0.962
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.952 0.952
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.724 0.724
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.714 0.714
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02256_2.00 IRF 16 121

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000008702 IRF 16 121

Links

Other IRF family TFs
Other Oryctolagus cuniculus TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_02206 Ancylostoma ceylanicum ANCCEY_02206 N
ANCDUO_19443 Ancylostoma duodenale ANCDUO_19443 N
augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0 N
BTMF_0000954001 Brugia timori BTMF_0000954001 N
BXY_0332200 Bursaphelenchus xylophilus BXY_0332200 N
CBG05270 Caenorhabditis briggsae CBG05270 N
CBN30611 Caenorhabditis brenneri CBN30611 N
CJA10118 Caenorhabditis japonica CJA10118 N
CRE19235 Caenorhabditis remanei CRE19235 N
CRE22320 Caenorhabditis remanei CRE22320 N
GPLIN_000607300 Globodera pallida GPLIN_000607300 N
GPLIN_000663400 Globodera pallida GPLIN_000663400 N
GPUH_0002529501 Gongylonema pulchrum GPUH_0002529501 N
L596_g18686 Steinernema carpocapsae L596_g18686 N
L596_g18692 Steinernema carpocapsae L596_g18692 N
L892_g2121 Steinernema scapterisci L892_g2121 N
L892_g23809 Steinernema scapterisci L892_g23809 N
L893_g20500 Steinernema glaseri L893_g20500 N
LOAG_12834 Loa loa LOAG_12834 N
MhA1_Contig194.frz3.gene8 Meloidogyne hapla MhA1_Contig194.frz3.gene8 N
Minc11538 Meloidogyne incognita Minc11538 N
nDi.2.2.2.g04775 Dirofilaria immitis nDi.2.2.2.g04775 N
NECAME_02646 Necator americanus NECAME_02646 N
nOo.2.0.1.g08044 Onchocerca ochengi nOo.2.0.1.g08044 N
PTRK_0000018500 Parastrongyloides trichosuri PTRK_0000018500 N
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N
RSKR_0000406200 Rhabditophanes kr3021 RSKR_0000406200 N
scaffold429-EXSNAP2012.6 Pristionchus exspectatus scaffold429-EXSNAP2012.6 N
scaffold50-EXSNAP2012.1 Pristionchus exspectatus scaffold50-EXSNAP2012.1 N
SMUV_0001020501 Syphacia muris SMUV_0001020501 N
SPAL_0000159200 Strongyloides papillosus SPAL_0000159200 N
SSTP_0000308900 Strongyloides stercoralis SSTP_0000308900 N
SVE_1011400 Strongyloides venezuelensis SVE_1011400 N
TCLT_0000508901 Thelazia callipaeda TCLT_0000508901 N
TCNE_0000967201 Toxocara canis TCNE_0000967201 N
nhr-32 Caenorhabditis elegans WBGene00003626 N
WBGene00239074 Onchocerca volvulus WBGene00239074 N
WUBG_12380 Wuchereria bancrofti WUBG_12380 N