Carubv10028602m.g (Capsella rubella)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 Carubv10028602m.g T244782_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.976 0.976
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10028602m Leafy 1 391

Links

Other Leafy family TFs
Other Capsella rubella TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017891 Oryza indica BGIOSGA017891 N 0.000
OGLUM05G20720 Oryza glumaepatula OGLUM05G20720 N 0.000
OLONG_007701 Oryza longistaminata OLONG_007701 N 0.000
OMERI05G17210 Oryza meridionalis OMERI05G17210 N 0.000
ONIVA05G20590 Oryza nivara ONIVA05G20590 N 0.000
OPUNC05G17330 Oryza punctata OPUNC05G17330 N 0.000
ORGLA05G0171000 Oryza glaberrima ORGLA05G0171000 N 0.000
ORUFI05G20870 Oryza rufipogon ORUFI05G20870 N 0.000