gene30683-v1.0-hybrid (Fragaria vesca)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 gene30683-v1.0-hybrid T244786_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.762 0.762
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30683.1-v1.0-hybrid Leafy 1 370

Links

Other Leafy family TFs
Other Fragaria vesca TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC198518.3_FG005 Zea mays AC198518.3_FG005 N
BGIOSGA013618 Oryza indica BGIOSGA013618 N
BGIOSGA035596 Oryza indica BGIOSGA035596 N
BGIOSGA037460 Oryza indica BGIOSGA037460 N
BRADI4G06567 Brachypodium distachyon BRADI4G06567 N
BRADI4G12615 Brachypodium distachyon BRADI4G12615 N
Ca_05643 Cicer arietinum Ca_05643 N
chr5.CM0200.490.nc Lotus japonicus chr5.CM0200.490.nc N
chr5.CM0200.500.nc Lotus japonicus chr5.CM0200.500.nc N
F775_23312 Aegilops tauschii F775_23312 N
gene12191-v1.0-hybrid Fragaria vesca gene12191-v1.0-hybrid N
GRMZM2G165188 Zea mays GRMZM2G165188 N
LPERR03G29580 Leersia perrieri LPERR03G29580 N
MDP0000876738 Malus domestica MDP0000876738 N
MTR_1g106470 Medicago truncatula MTR_1g106470 N
OB03G42180 Oryza brachyantha OB03G42180 N
OB11G25500 Oryza brachyantha OB11G25500 N
OBART11G20580 Oryza barthii OBART11G20580 N
OBART12G13380 Oryza barthii OBART12G13380 N
OGLUM03G34950 Oryza glumaepatula OGLUM03G34950 N
OGLUM11G20000 Oryza glumaepatula OGLUM11G20000 N
OGLUM12G15010 Oryza glumaepatula OGLUM12G15010 N
OLONG_003723 Oryza longistaminata OLONG_003723 N
OLONG_021754 Oryza longistaminata OLONG_021754 N
OLONG_028675 Oryza longistaminata OLONG_028675 N
OMERI03G32400 Oryza meridionalis OMERI03G32400 N
ONIVA03G36690 Oryza nivara ONIVA03G36690 N
ONIVA11G20620 Oryza nivara ONIVA11G20620 N
OPUNC03G32220 Oryza punctata OPUNC03G32220 N
OPUNC11G17200 Oryza punctata OPUNC11G17200 N
ORGLA03G0322200 Oryza glaberrima ORGLA03G0322200 N
ORGLA10G0168100 Oryza glaberrima ORGLA10G0168100 N
ORGLA11G0169400 Oryza glaberrima ORGLA11G0169400 N
ORGLA12G0196200 Oryza glaberrima ORGLA12G0196200 N
ORUFI03G36640 Oryza rufipogon ORUFI03G36640 N
ORUFI11G22390 Oryza rufipogon ORUFI11G22390 N
ORUFI12G14590 Oryza rufipogon ORUFI12G14590 N
OS11G0634700 Oryza sativa OS11G0634700 N
Pavir.Ca02388 Panicum virgatum Pavir.Ca02388 N
Pavir.Ca02532 Panicum virgatum Pavir.Ca02532 N
Pavir.Cb00430 Panicum virgatum Pavir.Cb00430 N
Pavir.Ha00126 Panicum virgatum Pavir.Ha00126 N
Pavir.Hb00249 Panicum virgatum Pavir.Hb00249 N
Pavir.Ia01481 Panicum virgatum Pavir.Ia01481 N
PGSC0003DMG400003231 Solanum tuberosum PGSC0003DMG400003231 N
Pm021173 Prunus mume Pm021173 N
PRUPE_ppa015724mg Prunus persica PRUPE_ppa015724mg N
Sb01g014580 Sorghum bicolor Sb01g014580 N
Sb08g019780 Sorghum bicolor Sb08g019780 N
Si022813m.g Setaria italica Si022813m.g N
Si024550m.g Setaria italica Si024550m.g N
Si028242m.g Setaria italica Si028242m.g N
Si038695m.g Setaria italica Si038695m.g N
Solyc10g049720.1 Solanum lycopersicum Solyc10g049720.1 N
Solyc10g049780.1 Solanum lycopersicum Solyc10g049780.1 N
TRAES3BF169000100CFD_g Triticum aestivum TRAES3BF169000100CFD_g N
Traes_3DL_801E89185 Triticum aestivum Traes_3DL_801E89185 N
TRIUR3_10349 Triticum urartu TRIUR3_10349 N