CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g110840
(
Medicago truncatula
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
MTR_1g110840
T245437_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH44217
LOB
4
109
SCNGCRVLRKGCSDDCIIKPCLEWISCPESQGHATLFLAKFYGRTGLLNLLTNATNQNDNPPAVFKSLLYEAAGRLVNPTYGALGLFWTADWSRCEAAVEAVLTGS
Links
Other
LOB
family TFs
Other
Medicago truncatula
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_05488
Cicer arietinum
Ca_05488
N
0.788
evm.TU.supercontig_3.514
Carica papaya
evm.TU.supercontig_3.514
N
0.717
GLYMA20G24950
Glycine max
GLYMA20G24950
N
0.778
MTR_6g054080
Medicago truncatula
MTR_6g054080
N
0.879
MTR_6g054150
Medicago truncatula
MTR_6g054150
N
0.889
MTR_6g453130
Medicago truncatula
MTR_6g453130
N
0.939
Pavir.Ea01295
Panicum virgatum
Pavir.Ea01295
N
0.704
PK04625.1
Cannabis sativa
PK04625.1
N
0.884
Sb01g032580
Sorghum bicolor
Sb01g032580
N
0.707