CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_6g054150
(
Medicago truncatula
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
MTR_6g054150
T245475_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH26404
LOB
4
109
SCNGCRVLRKGCNDDCIIKPCLEWISSSESQGRATLFLTKFYGRIGLLNLLTNATNQNQNPQVVFKSLLYEASGRLVNPTYGVLGLFWTGDWSRCEAAVEAVLTGS
Links
Other
LOB
family TFs
Other
Medicago truncatula
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_6g054080
Medicago truncatula
MTR_6g054080
N
0.970
MTR_6g453130
Medicago truncatula
MTR_6g453130
N
0.899
MTR_1g110840
Medicago truncatula
MTR_1g110840
N
0.889
PK04625.1
Cannabis sativa
PK04625.1
N
0.791
Ca_05488
Cicer arietinum
Ca_05488
N
0.778
GLYMA20G24950
Glycine max
GLYMA20G24950
N
0.768
Traes_4BL_D44ACD58E
Triticum aestivum
Traes_4BL_D44ACD58E
N
0.725