Bo3g184450 (Brassica oleracea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bo3g184450 T247984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.935 0.758
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g184450.1 MADF 81 152

Links

Other MADF family TFs
Other Brassica oleracea TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIL1 Arabidopsis thaliana AT1G54060 D 0.935
Bo6g033010 Brassica oleracea Bo6g033010 I 0.967
Bo6g050870 Brassica oleracea Bo6g050870 I 0.949
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.866
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.951
Bra014370 Brassica rapa Bra014370 I 0.953
Bra037960 Brassica rapa Bra037960 I 0.967
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.951
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.849
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.951
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.844
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.853
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.951
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.814
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.828
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.844
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.955