Bostr.7128s0077 (Boechera stricta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Bostr.7128s0077 T250600_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.962 0.871
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.832 0.643
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7128s0077.1.p MADF 99 174

Links

Other MADF family TFs
Other Boechera stricta TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.971
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.968
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.968
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.964
ASIL1 Arabidopsis thaliana AT1G54060 D 0.962
Bra014370 Brassica rapa Bra014370 I 0.962
Bo6g050870 Brassica oleracea Bo6g050870 I 0.954
Bo3g184450 Brassica oleracea Bo3g184450 I 0.951
Bo6g033010 Brassica oleracea Bo6g033010 I 0.951
Bra037960 Brassica rapa Bra037960 I 0.951
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.901
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.894
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.891
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.878
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.860
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.858
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.858
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.858
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.854
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.849
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.844
TCM_029209 Theobroma cacao TCM_029209 I 0.844
29727.m000472 Ricinus communis 29727.m000472 I 0.844
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.844
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.844
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.844
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.844
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.844
Cla015773 Citrullus lanatus Cla015773 I 0.843
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.843
MDP0000255104 Malus domestica MDP0000255104 I 0.835
MDP0000281471 Malus domestica MDP0000281471 I 0.835
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.835
ASIL2 Arabidopsis thaliana AT3G14180 D 0.832
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.832
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.832
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.832
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.832
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.832
PK22475.1 Cannabis sativa PK22475.1 N 0.830
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.829
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.825
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.820
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.820
Pm013209 Prunus mume Pm013209 I 0.820
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.820
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.820
Bo3g065930 Brassica oleracea Bo3g065930 I 0.818
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.818
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.817
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.817
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.814