Pm013209 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm013209 T250413_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.918 0.817
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm013209 MADF 83 160

Links

Other MADF family TFs
Other Prunus mume TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.971
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.970
MDP0000255104 Malus domestica MDP0000255104 I 0.964
MDP0000281471 Malus domestica MDP0000281471 I 0.964
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.958
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.955
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.945
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.943
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.943
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.943
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.941
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.941
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.937
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.933
Cla015773 Citrullus lanatus Cla015773 I 0.926
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.926
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.924
ASIL2 Arabidopsis thaliana AT3G14180 D 0.918
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.918
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.918
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.918
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.918
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.918
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.916
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.907
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.907
PK22475.1 Cannabis sativa PK22475.1 N 0.907
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.903
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.903
29727.m000472 Ricinus communis 29727.m000472 I 0.902
29814.m000741 Ricinus communis 29814.m000741 I 0.902
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.902
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.902
TCM_029209 Theobroma cacao TCM_029209 I 0.900
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.897
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.897
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.897
MDP0000097759 Malus domestica MDP0000097759 N 0.896
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.895
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.894
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.893
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.890
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.886
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.886
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.886
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.886
MDP0000943251 Malus domestica MDP0000943251 N 0.884
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.883
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.883
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.883
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.877
TCM_042467 Theobroma cacao TCM_042467 N 0.863
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.862
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.856
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.854
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.853
mgf006505m Mimulus guttatus mgf006505m I 0.849
Bo3g065930 Brassica oleracea Bo3g065930 I 0.848
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.848
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.846
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.846
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.831
Bo1g134590 Brassica oleracea Bo1g134590 I 0.828
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.820
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.820
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.820
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.820
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.820
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.816
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.814
Bo6g050870 Brassica oleracea Bo6g050870 I 0.812
Bra014370 Brassica rapa Bra014370 I 0.812