Bostr.28625s0284 (Boechera stricta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Bostr.28625s0284 T250595_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.871 0.616
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.28625s0284.1.p MADF 58 137

Links

Other MADF family TFs
Other Boechera stricta TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.962
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.910
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.901
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.901
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.900
TCM_029209 Theobroma cacao TCM_029209 I 0.898
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.898
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.898
29727.m000472 Ricinus communis 29727.m000472 I 0.896
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.896
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.895
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.893
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.891
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.890
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.890
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.890
Bra014370 Brassica rapa Bra014370 I 0.887
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.886
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.886
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.886
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.886
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.885
PK22475.1 Cannabis sativa PK22475.1 N 0.884
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.881
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.880
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.878
Bo6g050870 Brassica oleracea Bo6g050870 I 0.875
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.874
Cla015773 Citrullus lanatus Cla015773 I 0.873
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.873
ASIL1 Arabidopsis thaliana AT1G54060 D 0.871
Bo3g184450 Brassica oleracea Bo3g184450 I 0.866
Bo6g033010 Brassica oleracea Bo6g033010 I 0.866
Bra037960 Brassica rapa Bra037960 I 0.866
MDP0000255104 Malus domestica MDP0000255104 I 0.866
MDP0000281471 Malus domestica MDP0000281471 I 0.866
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.863
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.863
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.861
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.858
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.855
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.853
Pm013209 Prunus mume Pm013209 I 0.853
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.842
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.836
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.825
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.817
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.816