Gorai.010G235700 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.010G235700 T250721_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.882 0.817
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G235700.1 MADF 151 228

Links

Other MADF family TFs
Other Gossypium raimondii TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.967
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.967
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.964
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.964
Cla015773 Citrullus lanatus Cla015773 I 0.958
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.958
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.953
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.952
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.945
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.943
Pm013209 Prunus mume Pm013209 I 0.943
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.941
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.939
MDP0000255104 Malus domestica MDP0000255104 I 0.936
MDP0000281471 Malus domestica MDP0000281471 I 0.936
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.932
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.926
TCM_029209 Theobroma cacao TCM_029209 I 0.921
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.917
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.916
29727.m000472 Ricinus communis 29727.m000472 I 0.914
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.914
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.910
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.908
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.907
PK22475.1 Cannabis sativa PK22475.1 N 0.904
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.900
TCM_042467 Theobroma cacao TCM_042467 N 0.893
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.890
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.890
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.885
ASIL2 Arabidopsis thaliana AT3G14180 D 0.882
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.882
mgf006505m Mimulus guttatus mgf006505m I 0.882
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.882
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.882
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.882
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.882
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.878
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.877
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.877
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.877
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.873
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.873
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.867
Bo1g134590 Brassica oleracea Bo1g134590 I 0.863
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.860
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.858
MDP0000097759 Malus domestica MDP0000097759 N 0.858
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.856
29814.m000741 Ricinus communis 29814.m000741 I 0.855
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.854
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.851
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.849
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.849
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.845
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.844
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.844
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.843
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.842
MDP0000943251 Malus domestica MDP0000943251 N 0.842
mgf000047m Mimulus guttatus mgf000047m I 0.840
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.836
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.836
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.833
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.829
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.829
Bo6g050870 Brassica oleracea Bo6g050870 I 0.824
Aquca_039_00151 Aquilegia coerulea Aquca_039_00151 N 0.822
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.822
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.818
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.818
Bra037960 Brassica rapa Bra037960 I 0.816
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.814