AMTR_s00007p00263040 (Amborella trichopoda)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 AMTR_s00007p00263040 T247840_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05527 MADF 96 173

Links

Other MADF family TFs
Other Amborella trichopoda TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_029209 Theobroma cacao TCM_029209 I 0.935
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.928
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.924
29727.m000472 Ricinus communis 29727.m000472 I 0.908
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.898
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.896
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.896
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.896
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.878
PK22475.1 Cannabis sativa PK22475.1 N 0.876
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.868
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.865
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.859
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.858
Cla015773 Citrullus lanatus Cla015773 I 0.858
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.858
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.856
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.856
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.855
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.855
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.846
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.844
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.844
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.843
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.842
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.842
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.839
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.832
MDP0000255104 Malus domestica MDP0000255104 I 0.831
MDP0000281471 Malus domestica MDP0000281471 I 0.831
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.817
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.817
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.816
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.814
Pm013209 Prunus mume Pm013209 I 0.814