gene05956-v1.0-hybrid (Fragaria vesca)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 gene05956-v1.0-hybrid T250684_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05956.1-v1.0-hybrid MADF 175 247

Links

Other MADF family TFs
Other Fragaria vesca TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29872.m000548 Ricinus communis 29872.m000548 N 0.924
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N 0.943
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N 0.947
Cla015679 Citrullus lanatus Cla015679 N 0.947
Cucsa.358990 Cucumis sativus Cucsa.358990 N 0.947
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.931
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N 0.918
gene02091-v1.0-hybrid Fragaria vesca gene02091-v1.0-hybrid N 0.822
GLYMA13G43651 Glycine max GLYMA13G43651 N 0.884
GLYMA15G01730 Glycine max GLYMA15G01730 N 0.906
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N 0.908
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N 0.900
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N 0.946
Gorai.011G076900 Gossypium raimondii Gorai.011G076900 N 0.825
Lus10025772.g Linum usitatissimum Lus10025772.g N 0.896
Lus10035893.g Linum usitatissimum Lus10035893.g N 0.885
MDP0000260359 Malus domestica MDP0000260359 N 0.852
MDP0000276691 Malus domestica MDP0000276691 N 0.956
MDP0000500940 Malus domestica MDP0000500940 N 0.945
MDP0000578820 Malus domestica MDP0000578820 N 0.852
mgf024433m Mimulus guttatus mgf024433m N 0.920
MTR_2g102227 Medicago truncatula MTR_2g102227 N 0.921
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N 0.947
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N 0.886
PK03816.1 Cannabis sativa PK03816.1 N 0.911
Pm013502 Prunus mume Pm013502 N 0.962
Pm027397 Prunus mume Pm027397 N 0.879
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N 0.888
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N 0.918
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.962
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N 0.885
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N 0.886
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N 0.886
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N 0.875
TCM_028688 Theobroma cacao TCM_028688 N 0.933
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N 0.877