SapurV1A.0226s0070 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0226s0070 T250843_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.925 0.753
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.925 0.753
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.925 0.753
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.917 0.712
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0226s0070.1.p MADF 112 187
SapurV1A.0226s0070.2.p MADF 112 187
SapurV1A.0226s0070.3.p MADF 112 187

Links

Other MADF family TFs
Other Salix purpurea TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28077.m000081 Ricinus communis 28077.m000081 I 0.886
29815.m000504 Ricinus communis 29815.m000504 I 0.933
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.893
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.870
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.914
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.925
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.901
Bo5g137800 Brassica oleracea Bo5g137800 I 0.920
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.925
Bra029812 Brassica rapa Bra029812 I 0.920
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.866
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.925
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.925
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.939
Ca_20148 Cicer arietinum Ca_20148 I 0.914
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.940
Cla018015 Citrullus lanatus Cla018015 I 0.934
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.934
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.922
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.887
F775_31501 Aegilops tauschii F775_31501 I 0.892
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.926
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.946
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.923
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.881
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.923
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.920
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.831
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.869
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.829
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.888
MDP0000201016 Malus domestica MDP0000201016 I 0.873
MDP0000399495 Malus domestica MDP0000399495 I 0.873
MDP0000415733 Malus domestica MDP0000415733 I 0.873
mgf008067m Mimulus guttatus mgf008067m I 0.942
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.869
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.918
OB04G18670 Oryza brachyantha OB04G18670 I 0.866
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.883
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.889
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.901
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.901
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.858
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.925
Pm026265 Prunus mume Pm026265 I 0.927
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.964
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.896
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.896
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.927
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.885
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.896
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.896
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.837
Si009787m.g Setaria italica Si009787m.g I 0.829
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.918
TCM_022397 Theobroma cacao TCM_022397 I 0.906
TCM_043551 Theobroma cacao TCM_043551 I 0.845
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.925
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.892
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.892
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.892
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.928
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.869