evm.TU.contig_26687.2 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_26687.2 T258043_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_26687.2 MADS box 20 67
evm.TU.contig_26687.2 MADS box 106 127

Links

Other MADS box family TFs
Other Carica papaya TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000832201 Angiostrongylus cantonensis ACAC_0000832201 N
ACOC_0000241101 Angiostrongylus costaricensis ACOC_0000241101 N
ANCCAN_04748 Ancylostoma caninum ANCCAN_04748 I
ANCCEY_09710 Ancylostoma ceylanicum ANCCEY_09710 I
Bm5937 Brugia malayi Bm5937 I
BTMF_0000940801 Brugia timori BTMF_0000940801 I
BXY_0544800 Bursaphelenchus xylophilus BXY_0544800 I
CBG01382 Caenorhabditis briggsae CBG01382 I
CBN09492 Caenorhabditis brenneri CBN09492 I
CBN29810 Caenorhabditis brenneri CBN29810 I
CJA09451 Caenorhabditis japonica CJA09451 I
CRE08815 Caenorhabditis remanei CRE08815 I
DICVIV_01396 Dictyocaulus viviparus DICVIV_01396 I
EVEC_0001219101 Enterobius vermicularis EVEC_0001219101 I
GPLIN_001033000 Globodera pallida GPLIN_001033000 N
HPBE_0001572101 Heligmosomoides bakeri HPBE_0001572101 I
HPLM_0000403401 Haemonchus placei HPLM_0000403401 I
L596_g1691 Steinernema carpocapsae L596_g1691 I
L889_g31510 Steinernema feltiae L889_g31510 I
L892_g20637 Steinernema scapterisci L892_g20637 I
L893_g13923 Steinernema glaseri L893_g13923 I
LOAG_04009 Loa loa LOAG_04009 I
maker-nMf.1.1.scaf00497-augustus-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf00497-augustus-gene-0.10 N
MhA1_Contig1499.frz3.gene12 Meloidogyne hapla MhA1_Contig1499.frz3.gene12 N
nAv.1.0.1.g08649 Acanthocheilonema viteae nAv.1.0.1.g08649 I
NBR_0001674501 Nippostrongylus brasiliensis NBR_0001674501 N
NECAME_09584 Necator americanus NECAME_09584 I
PPA14239 Pristionchus pacificus PPA14239 I
PTRK_0000045900 Parastrongyloides trichosuri PTRK_0000045900 I
RSKR_0000332900 Rhabditophanes kr3021 RSKR_0000332900 N
scaffold1063-EXSNAP2012.7 Pristionchus exspectatus scaffold1063-EXSNAP2012.7 I
SPAL_0000741800 Strongyloides papillosus SPAL_0000741800 I
SSTP_0001193100 Strongyloides stercoralis SSTP_0001193100 I
SVE_1023400 Strongyloides venezuelensis SVE_1023400 I
SVUK_0000327101 Strongylus vulgaris SVUK_0000327101 I
TCLT_0000991301 Thelazia callipaeda TCLT_0000991301 N
TELCIR_22084 Teladorsagia circumcincta TELCIR_22084 I
dmd-8 Caenorhabditis elegans WBGene00020708 D
WBGene00243680 Onchocerca volvulus WBGene00243680 N