Cmyd_10012649 (Chelonia mydas)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cmyd_10012649 T261257_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10012649 MBD 2 40
Cmyd_10012649 MBD 46 164

Links

Other MBD family TFs
Other Chelonia mydas TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R000663 Aptenodytes forsteri Afo_R000663 I 0.884
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.874
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.718
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.705
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 0.916
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.705
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.884
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.874
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.705
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.874
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.863
MBD2 Homo sapiens ENSG00000134046 D 0.705
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.705
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.705
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.874
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.705
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.789
ENSMEUG00000016480 Macropus eugenii ENSMEUG00000016480 I 0.842
ENSMGAG00000009222 Meleagris gallopavo ENSMGAG00000009222 N 0.758
MBD2 Microcebus murinus ENSMICG00000008970 I 0.874
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.705
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.705
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.874
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.705
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.705
ENSP00000256429 Macaca fascicularis ENSP00000256429 I 0.874
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.874
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.705
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.705
MBD2 Sus scrofa ENSSSCG00000004528 I 0.705
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.705
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.716
ENSTSYG00000013361 Tarsius syrichta ENSTSYG00000013361 I 0.853
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.747
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.884
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.895
Pvit_09821 Pogona vitticeps Pvit_09821 N 0.705