Ogr03458 (Ophisaurus gracilis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Ogr03458 T261291_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.822 0.822
Mbd2
M09258_2.00 		Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B 		0.806 0.806
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr03458 MBD 3 74
Ogr03458 MBD 80 148

Links

Other MBD family TFs
Other Ophisaurus gracilis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.985
Afo_R000663 Aptenodytes forsteri Afo_R000663 I 0.978
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.969
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.967
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.961
ENSTSYG00000013361 Tarsius syrichta ENSTSYG00000013361 I 0.956
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.955
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.955
MBD2 Homo sapiens ENSG00000134046 D 0.955
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.955
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.955
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.955
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.955
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.955
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.955
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.955
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.955
MBD2 Otolemur garnettii ENSOGAG00000008028 I 0.946
Mbd2 Rattus norvegicus ENSRNOG00000011853 I 0.946
Mbd2 Mus musculus ENSMUSG00000024513 D 0.937
ENSMEUG00000016480 Macropus eugenii ENSMEUG00000016480 I 0.935
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.915
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.887
Cmyd_10012649 Chelonia mydas Cmyd_10012649 I 0.884
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.876
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.868
mbd2 Danio rerio ENSDARG00000075952 I 0.853
mbd2.S Xenopus laevis XB-GENE-493780 I 0.851
MBD2 Sus scrofa ENSSSCG00000004528 I 0.822
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.814
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.813
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.806
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.806
ENSPFOG00000003939 Poecilia formosa ENSPFOG00000003939 I 0.802
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.792
mbd3a Danio rerio ENSDARG00000061774 I 0.792
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.783
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.782
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.765
ENSAMXG00000007765 Astyanax mexicanus ENSAMXG00000007765 N 0.754
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.750
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.744
MBD2 Myotis lucifugus ENSMLUG00000009980 I 0.741
mbd3 Xenopus tropicalis XB-GENE-491553 I 0.733
mbd3.S Xenopus laevis XB-GENE-491557 I 0.731
Pvit_09821 Pogona vitticeps Pvit_09821 N 0.729
MBD3 Equus caballus ENSECAG00000015485 I 0.726
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.726
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.721
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 0.713
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.713
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.713
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.713
MBD3 Canis familiaris ENSCAFG00000019503 N 0.708
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.705