Afo_R000663 (Aptenodytes forsteri)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Afo_R000663 T261216_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.785 0.785
Mbd2
M09258_2.00 		Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B 		0.763 0.763
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R000663 MBD 1 36
Afo_R000663 MBD 42 110

Links

Other MBD family TFs
Other Aptenodytes forsteri TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 1.000
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.989
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.978
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.968
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.968
MBD2 Microcebus murinus ENSMICG00000008970 I 0.957
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.957
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.957
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.957
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.957
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.957
ENSP00000256429 Macaca fascicularis ENSP00000256429 I 0.957
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.957
ENSTSYG00000013361 Tarsius syrichta ENSTSYG00000013361 I 0.946
ENSMEUG00000016480 Macropus eugenii ENSMEUG00000016480 I 0.946
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.892
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.887
Cmyd_10012649 Chelonia mydas Cmyd_10012649 I 0.884
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.795
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.785
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.785
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.785
MBD2 Sus scrofa ENSSSCG00000004528 I 0.785
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.774
ENSMGAG00000009222 Meleagris gallopavo ENSMGAG00000009222 N 0.763
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.763
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.750
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.741
Mbd3 Mus musculus ENSMUSG00000035478 N 0.731
ENSPMAG00000000415 Petromyzon marinus ENSPMAG00000000415 N 0.720
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.710
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.709