Cucsa.105420 (Cucumis sativus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cucsa.105420 T261358_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.105420.1 MBD 18 90

Links

Other MBD family TFs
Other Cucumis sativus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g066360 Brassica oleracea Bo8g066360 N 0.712
Bra016665 Brassica rapa Bra016665 N 0.712
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.707
Cla012920 Citrullus lanatus Cla012920 N 0.753
Cla015614 Citrullus lanatus Cla015614 N 0.932
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.726
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.726
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.712
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.712
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.712
MDP0000248422 Malus domestica MDP0000248422 N 0.712
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.712
PK24888.1 Cannabis sativa PK24888.1 N 0.716
Pm013666 Prunus mume Pm013666 N 0.712
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.795
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.712
TCM_038107 Theobroma cacao TCM_038107 N 0.753
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.740