Bostr.18473s0301 (Boechera stricta)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Bostr.18473s0301 T261432_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.18473s0301.1.p MBD 25 136

Links

Other MBD family TFs
Other Boechera stricta TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG011983.1 Alligator sinensis Alligator_sinensis_CCG011983.1 I
CGI_10016801 Crassostrea gigas CGI_10016801 I
ENSAMEG00000016234 Ailuropoda melanoleuca ENSAMEG00000016234 I
ENSAMXG00000007663 Astyanax mexicanus ENSAMXG00000007663 I
ENSAMXG00000008540 Astyanax mexicanus ENSAMXG00000008540 I
ENSAPLG00000012403 Anas platyrhynchos ENSAPLG00000012403 I
PRDM12 Bos taurus ENSBTAG00000023797 I
PRDM12 Canis familiaris ENSCAFG00000023076 I
ENSCSAG00000014756 Chlorocebus sabaeus ENSCSAG00000014756 I
prdm12b Danio rerio ENSDARG00000007430 I
PRDM12 Dasypus novemcinctus ENSDNOG00000042302 I
ENSFALG00000001445 Ficedula albicollis ENSFALG00000001445 I
PRDM12 Homo sapiens ENSG00000130711 D
prdm12b Gasterosteus aculeatus ENSGACG00000016713 I
ENSGMOG00000011797 Gadus morhua ENSGMOG00000011797 I
ENSLACG00000017560 Latimeria chalumnae ENSLACG00000017560 I
PRDM12 Loxodonta africana ENSLAFG00000006979 I
ENSLOCG00000005429 Lepisosteus oculatus ENSLOCG00000005429 I
ENSMEUG00000003828 Macropus eugenii ENSMEUG00000003828 I
PRDM12 Meleagris gallopavo ENSMGAG00000005438 I
PRDM12 Microcebus murinus ENSMICG00000015480 I
PRDM12 Monodelphis domestica ENSMODG00000012108 I
Prdm12 Mus musculus ENSMUSG00000079466 I
ENSOANG00000001043 Ornithorhynchus anatinus ENSOANG00000001043 I
PRDM12 Oryctolagus cuniculus ENSOCUG00000008241 I
PRDM12 Otolemur garnettii ENSOGAG00000007557 I
ENSONIG00000002871 Oreochromis niloticus ENSONIG00000002871 I
PRDM12 Ochotona princeps ENSOPRG00000008680 I
prdm12b Oryzias latipes ENSORLG00000007114 I
ENSORLG00000017558 Oryzias latipes ENSORLG00000017558 I
ENSPANG00000025967 Papio anubis ENSPANG00000025967 I
ENSPFOG00000019841 Poecilia formosa ENSPFOG00000019841 I
ENSPPYG00000019694 Pongo abelii ENSPPYG00000019694 I
ENSPSIG00000006739 Pelodiscus sinensis ENSPSIG00000006739 I
PRDM12 Pan troglodytes ENSPTRG00000021475 I
PRDM12 Pteropus vampyrus ENSPVAG00000001511 I
Prdm12 Rattus norvegicus ENSRNOG00000009218 I
ENSSHAG00000015972 Sarcophilus harrisii ENSSHAG00000015972 I
PRDM12 Sus scrofa ENSSSCG00000005703 I
ENSSTOG00000005986 Ictidomys tridecemlineatus ENSSTOG00000005986 I
ENSTNIG00000005859 Tetraodon nigroviridis ENSTNIG00000005859 I
ENSTRUG00000013239 Takifugu rubripes ENSTRUG00000013239 I
prdm12b Takifugu rubripes ENSTRUG00000018659 I
ENSXMAG00000005537 Xiphophorus maculatus ENSXMAG00000005537 I
fgenesh2_pg.scaffold_504000008 Branchiostoma floridae fgenesh2_pg.scaffold_504000008 I
gw.504.9.1 Branchiostoma floridae gw.504.9.1 I
LotgiG130157 Lottia gigantea LotgiG130157 I
NEMVEDRAFT_v1g119550 Nematostella vectensis NEMVEDRAFT_v1g119550 I
Ocbimv22004421m.g Octopus bimaculoides Ocbimv22004421m.g I
Ogr15453 Ophisaurus gracilis Ogr15453 I
Pvit_04639 Pogona vitticeps Pvit_04639 I
Sakowv30035316m.g Saccoglossus kowalevskii Sakowv30035316m.g I
TriadG14897 Trichoplax adhaerens TriadG14897 I
prdm12 Xenopus tropicalis XB-GENE-953729 I
prdm12.L Xenopus laevis XB-GENE-953734 I