BGIOSGA022369 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA022369 T266893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.785 0.849
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.785 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA022369-PA Myb 142 188
BGIOSGA022369-PA Myb 194 239

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008836 Ricinus communis 30174.m008836 N 0.000
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.000
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N 0.000
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.000
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.000
Cucsa.120560 Cucumis sativus Cucsa.120560 N 0.000
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.000
Eucgr.E01501 Eucalyptus grandis Eucgr.E01501 N 0.000
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N 0.000
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N 0.000
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.000
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.000
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N 0.000
Gorai.003G169800 Gossypium raimondii Gorai.003G169800 N 0.000
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N 0.000
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N 0.000
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.000
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.000
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.000
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.000
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.000
Lus10009283.g Linum usitatissimum Lus10009283.g N 0.000
Lus10015881.g Linum usitatissimum Lus10015881.g N 0.000
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.000
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.000
PK01122.1 Cannabis sativa PK01122.1 N 0.000
PK22765.1 Cannabis sativa PK22765.1 N 0.000
Pm017841 Prunus mume Pm017841 N 0.000
POPTR_0002s14570 Populus trichocarpa POPTR_0002s14570 N 0.000
POPTR_0014s05840 Populus trichocarpa POPTR_0014s05840 N 0.000
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.000
SapurV1A.0033s0510 Salix purpurea SapurV1A.0033s0510 N 0.000
SapurV1A.0382s0270 Salix purpurea SapurV1A.0382s0270 N 0.000
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.000
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N 0.000
TCM_005554 Theobroma cacao TCM_005554 N 0.000
TCM_016018 Theobroma cacao TCM_016018 N 0.000
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N 0.000
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.000
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.000