ORGLA01G0168300 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA01G0168300 T276629_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.787 0.830
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.787 0.830
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.787 0.830
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.787 0.830
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.753 0.872
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.701 0.809
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.677 0.766
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.677 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA01G0168300.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006534 Ricinus communis 30169.m006534 N
SPCH Arabidopsis lyrata Al_scaffold_0008_1712 N
AMTR_s00015p00239460 Amborella trichopoda AMTR_s00015p00239460 N
Aquca_037_00084 Aquilegia coerulea Aquca_037_00084 N
MUTE Arabidopsis thaliana AT3G06120 N
SPCH Arabidopsis thaliana AT5G53210 N
BGIOSGA006748 Oryza indica BGIOSGA006748 N
BGIOSGA020491 Oryza indica BGIOSGA020491 N
BGIOSGA023024 Oryza indica BGIOSGA023024 N
Bo2g046020 Brassica oleracea Bo2g046020 N
Bo2g075510 Brassica oleracea Bo2g075510 N
Bo3g022850 Brassica oleracea Bo3g022850 N
Bo3g060420 Brassica oleracea Bo3g060420 N
Bo6g114730 Brassica oleracea Bo6g114730 N
Bo9g110960 Brassica oleracea Bo9g110960 N
Bostr.2570s0048 Boechera stricta Bostr.2570s0048 N
Bostr.26833s0957 Boechera stricta Bostr.26833s0957 N
Bra001183 Brassica rapa Bra001183 N
Bra003073 Brassica rapa Bra003073 N
Bra008017 Brassica rapa Bra008017 N
Bra022638 Brassica rapa Bra022638 N
Bra029088 Brassica rapa Bra029088 N
BRADI1G38650 Brachypodium distachyon BRADI1G38650 N
BRADI3G09670 Brachypodium distachyon BRADI3G09670 N
Cagra.0084s0068 Capsella grandiflora Cagra.0084s0068 N
Cagra.1772s0035 Capsella grandiflora Cagra.1772s0035 N
Carubv10012751m.g Capsella rubella Carubv10012751m.g N
Carubv10026630m.g Capsella rubella Carubv10026630m.g N
cassava11522.m1 Manihot esculenta cassava11522.m1 N
cassava32469.m1 Manihot esculenta cassava32469.m1 N
cassava34492.m1 Manihot esculenta cassava34492.m1 N
cassava7222.valid.m1 Manihot esculenta cassava7222.valid.m1 N
Ca_03951 Cicer arietinum Ca_03951 N
Ca_13080 Cicer arietinum Ca_13080 N
Ciclev10007150m.g Citrus clementina Ciclev10007150m.g N
Cla004300 Citrullus lanatus Cla004300 N
Cla016479 Citrullus lanatus Cla016479 N
Cucsa.012930 Cucumis sativus Cucsa.012930 N
Cucsa.313010 Cucumis sativus Cucsa.313010 N
Eucgr.A02667 Eucalyptus grandis Eucgr.A02667 N
Eucgr.H03591 Eucalyptus grandis Eucgr.H03591 N
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N
evm.TU.supercontig_3.51 Carica papaya evm.TU.supercontig_3.51 N
gene06093-v1.0-hybrid Fragaria vesca gene06093-v1.0-hybrid N
GLYMA04G41710 Glycine max GLYMA04G41710 N
GLYMA06G13081 Glycine max GLYMA06G13081 N
Gorai.004G243100 Gossypium raimondii Gorai.004G243100 N
Gorai.006G054300 Gossypium raimondii Gorai.006G054300 N
Gorai.008G270700 Gossypium raimondii Gorai.008G270700 N
Gorai.011G110900 Gossypium raimondii Gorai.011G110900 N
GRMZM2G045109 Zea mays GRMZM2G045109 N
GRMZM2G064638 Zea mays GRMZM2G064638 N
GRMZM2G085751 Zea mays GRMZM2G085751 N
GSMUA_Achr10G01060_001 Musa acuminata GSMUA_Achr10G01060_001 N
GSMUA_Achr8G19870_001 Musa acuminata GSMUA_Achr8G19870_001 N
LPERR02G09400 Leersia perrieri LPERR02G09400 N
LPERR06G13950 Leersia perrieri LPERR06G13950 N
LPERR09G09700 Leersia perrieri LPERR09G09700 N
Lus10001066.g Linum usitatissimum Lus10001066.g N
Lus10007139.g Linum usitatissimum Lus10007139.g N
Lus10014938.g Linum usitatissimum Lus10014938.g N
Lus10039328.g Linum usitatissimum Lus10039328.g N
MDP0000131133 Malus domestica MDP0000131133 N
MDP0000205030 Malus domestica MDP0000205030 N
MDP0000318772 Malus domestica MDP0000318772 N
MDP0000794913 Malus domestica MDP0000794913 N
mgf011108m Mimulus guttatus mgf011108m N
mgf014552m Mimulus guttatus mgf014552m N
MLOC_54435 Hordeum vulgare MLOC_54435 N
MTR_3g090850 Medicago truncatula MTR_3g090850 N
MTR_5g064950 Medicago truncatula MTR_5g064950 N
OB02G19900 Oryza brachyantha OB02G19900 N
OBART02G11110 Oryza barthii OBART02G11110 N
OBART05G28280 Oryza barthii OBART05G28280 N
OBART06G16920 Oryza barthii OBART06G16920 N
OGLUM02G11060 Oryza glumaepatula OGLUM02G11060 N
OGLUM05G29710 Oryza glumaepatula OGLUM05G29710 N
OGLUM06G17990 Oryza glumaepatula OGLUM06G17990 N
OLONG_006958 Oryza longistaminata OLONG_006958 N
OLONG_015104 Oryza longistaminata OLONG_015104 N
OMERI02G11850 Oryza meridionalis OMERI02G11850 N
OMERI06G17780 Oryza meridionalis OMERI06G17780 N
ONIVA02G12460 Oryza nivara ONIVA02G12460 N
ONIVA05G30250 Oryza nivara ONIVA05G30250 N
ONIVA06G19730 Oryza nivara ONIVA06G19730 N
OPUNC02G09860 Oryza punctata OPUNC02G09860 N
OPUNC05G25820 Oryza punctata OPUNC05G25820 N
OPUNC06G15310 Oryza punctata OPUNC06G15310 N
orange1.1g042904m.g Citrus sinensis orange1.1g042904m.g N
ORGLA02G0100500 Oryza glaberrima ORGLA02G0100500 N
ORGLA05G0246000 Oryza glaberrima ORGLA05G0246000 N
ORGLA06G0140300 Oryza glaberrima ORGLA06G0140300 N
ORUFI02G11080 Oryza rufipogon ORUFI02G11080 N
ORUFI05G30290 Oryza rufipogon ORUFI05G30290 N
ORUFI06G17910 Oryza rufipogon ORUFI06G17910 N
OS02G0257500 Oryza sativa OS02G0257500 N
OS05G0597000 Oryza sativa OS05G0597000 N
OS06G0526100 Oryza sativa OS06G0526100 N
Pavir.Aa02723 Panicum virgatum Pavir.Aa02723 N
Pavir.Ab01030 Panicum virgatum Pavir.Ab01030 N
Pavir.Da00918 Panicum virgatum Pavir.Da00918 N
Pavir.Db01402 Panicum virgatum Pavir.Db01402 N
Pavir.Fb01393 Panicum virgatum Pavir.Fb01393 N
Pavir.J25730 Panicum virgatum Pavir.J25730 N
PDK_20s1314901g001 Phoenix dactylifera PDK_20s1314901g001 N
PGSC0003DMG400009101 Solanum tuberosum PGSC0003DMG400009101 N
PK01904.1 Cannabis sativa PK01904.1 N
PK27921.1 Cannabis sativa PK27921.1 N
Pm002111 Prunus mume Pm002111 N
Pm008014 Prunus mume Pm008014 N
Pm019784 Prunus mume Pm019784 N
POPTR_0012s01370 Populus trichocarpa POPTR_0012s01370 N
POPTR_0015s06160 Populus trichocarpa POPTR_0015s06160 N
PRUPE_ppa015055mg Prunus persica PRUPE_ppa015055mg N
PRUPE_ppa019299mg Prunus persica PRUPE_ppa019299mg N
PRUPE_ppa020862mg Prunus persica PRUPE_ppa020862mg N
SapurV1A.0058s0640 Salix purpurea SapurV1A.0058s0640 N
SapurV1A.0377s0010 Salix purpurea SapurV1A.0377s0010 N
SapurV1A.1043s0040 Salix purpurea SapurV1A.1043s0040 N
SapurV1A.1227s0030 Salix purpurea SapurV1A.1227s0030 N
Sb04g009390 Sorghum bicolor Sb04g009390 N
Sb10g020490 Sorghum bicolor Sb10g020490 N
MUTE Arabidopsis lyrata scaffold_300691.1 N
Si006640m.g Setaria italica Si006640m.g N
Si017482m.g Setaria italica Si017482m.g N
Solyc01g098720.2 Solanum lycopersicum Solyc01g098720.2 N
Solyc03g007410.2 Solanum lycopersicum Solyc03g007410.2 N
TCM_015345 Theobroma cacao TCM_015345 N
Thhalv10013877m.g Eutrema salsugineum Thhalv10013877m.g N
Thhalv10022251m.g Eutrema salsugineum Thhalv10022251m.g N
Traes_7DL_1717A9083 Triticum aestivum Traes_7DL_1717A9083 N
SPCH Vitis vinifera VIT_16s0050g02500 N