Sb10g000590 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb10g000590 T279323_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.857 0.957
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.849 0.913
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.849 0.913
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.849 0.913
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.849 0.913
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.849 0.913
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.847 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.847 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.847 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.834 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.819 0.891
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.819 0.891
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.819 0.891
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.704 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.704 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.704 0.674
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.672 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g000590.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N 0.000
AMTR_s00056p00209700 Amborella trichopoda AMTR_s00056p00209700 N 0.000
SIGC Arabidopsis thaliana AT3G53920 N 0.000
Bo4g120510 Brassica oleracea Bo4g120510 N 0.000
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N 0.000
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N 0.000
Carubv10016920m.g Capsella rubella Carubv10016920m.g N 0.000
cassava18263.valid.m1 Manihot esculenta cassava18263.valid.m1 N 0.000
Ca_14896 Cicer arietinum Ca_14896 N 0.000
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N 0.000
GLYMA14G22170 Glycine max GLYMA14G22170 N 0.000
GLYMA17G26620 Glycine max GLYMA17G26620 N 0.000
MTR_1g007370 Medicago truncatula MTR_1g007370 N 0.000
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N 0.000
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N 0.000
SapurV1A.0890s0100 Salix purpurea SapurV1A.0890s0100 N 0.000
SIGC Vitis vinifera VIT_04s0008g00600 N 0.000