GLYMA17G26620 (Glycine max)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GLYMA17G26620 T323844_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G26620.1 Sigma 70 317 387
GLYMA17G26620.2 Sigma 70 317 387
GLYMA17G26620.3 Sigma 70 317 387

Links

Other Sigma 70 family TFs
Other Glycine max TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA14G22170 Glycine max GLYMA14G22170 N 0.930
Ca_14896 Cicer arietinum Ca_14896 N 0.887
MTR_1g007370 Medicago truncatula MTR_1g007370 N 0.859
PK05603.1 Cannabis sativa PK05603.1 N 0.831
cassava18263.valid.m1 Manihot esculenta cassava18263.valid.m1 N 0.817
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N 0.803
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N 0.803
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N 0.803
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N 0.789
SIGC Arabidopsis thaliana AT3G53920 N 0.789
PRUPE_ppa003696mg Prunus persica PRUPE_ppa003696mg N 0.789
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N 0.789
gene09028-v1.0-hybrid Fragaria vesca gene09028-v1.0-hybrid N 0.789
Gorai.010G103500 Gossypium raimondii Gorai.010G103500 N 0.789
Bo4g120510 Brassica oleracea Bo4g120510 N 0.775
TCM_037242 Theobroma cacao TCM_037242 N 0.775
Pm005208 Prunus mume Pm005208 N 0.775
29794.m003368 Ricinus communis 29794.m003368 N 0.775
SapurV1A.0890s0100 Salix purpurea SapurV1A.0890s0100 N 0.775
Bra014857 Brassica rapa Bra014857 N 0.761
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N 0.761
Carubv10016920m.g Capsella rubella Carubv10016920m.g N 0.761
MDP0000135483 Malus domestica MDP0000135483 N 0.761
MDP0000315125 Malus domestica MDP0000315125 N 0.761
Thhalv10010251m.g Eutrema salsugineum Thhalv10010251m.g N 0.761
GSMUA_Achr4G01060_001 Musa acuminata GSMUA_Achr4G01060_001 N 0.746
PGSC0003DMG400025465 Solanum tuberosum PGSC0003DMG400025465 N 0.746
Solyc08g065970.2 Solanum lycopersicum Solyc08g065970.2 N 0.746
SIGC Vitis vinifera VIT_04s0008g00600 N 0.746
AMTR_s00056p00209700 Amborella trichopoda AMTR_s00056p00209700 N 0.732
Eucgr.C00620 Eucalyptus grandis Eucgr.C00620 N 0.732
mgf012819m Mimulus guttatus mgf012819m N 0.704
Aquca_001_00199 Aquilegia coerulea Aquca_001_00199 N 0.704